RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 NSUN3Q9H649 340 aaKnown RBP12.43□□□□□ -0.42
PFDN5-210ENST00000550513 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-210ENST00000550513 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
PFDN5-210ENST00000550513 HCN4Q9Y3Q4 1203 aa12.43□□□□□ -0.42
PFDN5-210ENST00000550513 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
PFDN5-210ENST00000550513 MYO7AQ13402 2215 aa12.43□□□□□ -0.42
PFDN5-210ENST00000550513 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 MAFGO15525 162 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 NAPAP54920 295 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 MRPS6P82932 125 aaKnown RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 TCEAL5Q5H9L2 206 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 TMEM31Q5JXX7 168 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 FBXO47Q5MNV8 452 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 FAM122AQ96E09 287 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 LRFN3Q9BTN0 628 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 FAM49AQ9H0Q0 323 aaPredicted RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 RC3H2Q9HBD1 1191 aaKnown RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
PFDN5-210ENST00000550513 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
PFDN5-210ENST00000550513 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 H3BQ06 376 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-210ENST00000550513 M0QZ92 97 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-210ENST00000550513 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
PFDN5-210ENST00000550513 MARCH8Q5T0T0 291 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 FAM178BQ8IXR5 827 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 NEK9Q8TD19 979 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 PABPC5Q96DU9 382 aaKnown RBP12.41□□□□□ -0.42
PFDN5-210ENST00000550513 SDF4Q9BRK5 362 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 C11orf84Q9BUA3 381 aaPredicted RBP12.41□□□□□ -0.42
PFDN5-210ENST00000550513 CD320Q9NPF0 282 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 KCNH7Q9NS40 1196 aa12.41□□□□□ -0.42
PFDN5-210ENST00000550513 NFASCO94856 1347 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 FAM86C2PA6NEL3 165 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 INSRRP14616 1297 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 ADCY7P51828 1080 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 ACTR2P61160 394 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-210ENST00000550513 RTN1Q16799 776 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 IER5Q5VY09 327 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 GJD3Q8N144 294 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
PFDN5-210ENST00000550513 TNPO1Q92973 898 aaKnown RBP12.4□□□□□ -0.42
PFDN5-210ENST00000550513 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 PGBD1Q96JS3 809 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 PCYT2Q99447 389 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 LMAN2LQ9H0V9 348 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 RIC8AQ9NPQ8 531 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 C11orf16Q9NQ32 467 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 TRPV2Q9Y5S1 764 aa12.4□□□□□ -0.42
PFDN5-210ENST00000550513 PI4K2BG5E9Z4 385 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 ENPP3O14638 875 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 ZBTB43O43298 467 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 GPR37L1O60883 481 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 CSPG5O95196 566 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 RB1P06400 928 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 CD52P31358 61 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 BMPR1AP36894 532 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 TMEM62Q0P6H9 643 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 PAK2Q13177 524 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 COL19A1Q14993 1142 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 LINC01599Q8WXQ3 324 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
PFDN5-210ENST00000550513 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
PFDN5-210ENST00000550513 TCEANC2Q96MN5 208 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 FTHL17Q9BXU8 183 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 AGO3Q9H9G7 860 aaKnown RBP12.39□□□□□ -0.43
PFDN5-210ENST00000550513 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
PFDN5-210ENST00000550513 IGSF9BQ9UPX0 1349 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 STXBP3O00186 592 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 GRM6O15303 877 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms