RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
HDAC7-229ENST00000549883 ABHD15Q6UXT9 468 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 CCDC60Q8IWA6 550 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-229ENST00000549883 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
HDAC7-229ENST00000549883 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 ZNF577Q9BSK1 485 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 PHF20Q9BVI0 1012 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 SMARCAD1Q9H4L7 1026 aa11.12□□□□□ -0.63
HDAC7-229ENST00000549883 ORC3Q9UBD5 711 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-229ENST00000549883 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-229ENST00000549883 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 MSH4O15457 936 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 INSRRP14616 1297 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 ATP4AP20648 1035 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 COL6A3P12111 3177 aa11.11□□□□□ -0.63
HDAC7-229ENST00000549883 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 RSPH10B2B2RC85 870 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 WNT7AO00755 349 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 SLC37A4O43826 429 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 CDKL5O76039 1030 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 CHRNA1P02708 482 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 CXCL10P02778 98 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 PFKMP08237 780 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 RSPH10BP0C881 870 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 RFC2P35250 354 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 STAT5BP51692 787 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 DEFB103AP81534 67 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 NR5A1Q13285 461 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 MCTP2Q6DN12 878 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 TRMT1LQ7Z2T5 733 aaKnown RBP11.1□□□□□ -0.63
HDAC7-229ENST00000549883 SPRED2Q7Z698 418 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 MYLIPQ8WY64 445 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 TIFAQ96CG3 184 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 CDX2Q99626 313 aaPredicted RBP11.1□□□□□ -0.63
HDAC7-229ENST00000549883 C22orf23Q9BZE7 217 aa11.1□□□□□ -0.63
HDAC7-229ENST00000549883 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 ZBTB42B2RXF5 422 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 BACH1O14867 736 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 CD2BP2O95400 341 aaKnown RBP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 USP11P51784 963 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 WDR5P61964 334 aaKnown RBP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 SETQ01105 290 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 TMEM62Q0P6H9 643 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 NONOQ15233 471 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 UGCGQ16739 394 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC7-229ENST00000549883 PIK3AP1Q6ZUJ8 805 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 PLPPR4Q7Z2D5 763 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 DBF4BQ8NFT6 615 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 TNFRSF25Q93038 417 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 MBOAT7Q96N66 472 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 AZI2Q9H6S1 392 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 TUBE1Q9UJT0 475 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 TRPC6Q9Y210 931 aa11.09□□□□□ -0.63
HDAC7-229ENST00000549883 CYP3A7-CYP3A51PA0A087WV96 503 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 POTEB3A0JP26 581 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 CHMP2AO43633 222 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF862O60290 1169 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 PSMD10O75832 226 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 GNAT1P11488 350 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 CYP3A7P24462 503 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
HDAC7-229ENST00000549883 MGAT3Q09327 533 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-229ENST00000549883 LETM2Q2VYF4 491 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 Q4G0T1 1027 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 PLEKHG4Q58EX7 1191 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 FAM26DQ5JW98 314 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 GALNT17Q6IS24 598 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 MIS18BP1Q6P0N0 1132 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 PDXDC2PQ6P474 469 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 CNKSR3Q6P9H4 555 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 FAM49AQ9H0Q0 323 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 TBC1D22BQ9NU19 505 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 GABBR1Q9UBS5 961 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
HDAC7-229ENST00000549883 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms