RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SCFD2Q8WU76 684 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 COPS5Q92905 334 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 SCARF2Q96GP6 870 aaPredicted RBP7.71□□□□□ -1.18
TMEM116-208ENST00000549537 PIGSQ96S52 555 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 IWS1Q96ST2 819 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 MAP3K14Q99558 947 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 PXMP2Q9NR77 195 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 TMEM39AQ9NV64 488 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 MTMR10Q9NXD2 777 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 CHD7Q9P2D1 2997 aa7.71□□□□□ -1.18
TMEM116-208ENST00000549537 BAZ2BQ9UIF8 2168 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ERICH2A1L162 156 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 CARNS1A5YM72 827 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SH2B2O14492 632 aaPredicted RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 NKRFO15226 690 aaKnown RBP eCLIP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PRC1O43663 620 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 DHX16O60231 1041 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ZEB2O60315 1214 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 DDAH1O94760 285 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PSMC6P62333 389 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PURAQ00577 322 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ARHGAP1Q07960 439 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ITGA7Q13683 1181 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SART3Q15020 963 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PPP2R5BQ15173 497 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PPP1R26Q5T8A7 1209 aaPredicted RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ZNF385CQ66K41 422 aaPredicted RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 MFSD5Q6N075 450 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SND1Q7KZF4 910 aaKnown RBP eCLIP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 C16orf59Q7L2K0 433 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 CATIPQ7Z7H3 387 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 ZNF654Q8IZM8 581 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SAMD3Q8N6K7 520 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 OR6J1Q8NGC5 347 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 VTI1AQ96AJ9 217 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 VWCEQ96DN2 955 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 RMDN3Q96TC7 470 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 MPHOSPH6Q99547 160 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 MYL10Q9BUA6 226 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SPZ1Q9BXG8 430 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 SEZ6LQ9BYH1 1024 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 MAP3K20Q9NYL2 800 aaKnown RBP7.7□□□□□ -1.18
TMEM116-208ENST00000549537 PCDHA1Q9Y5I3 950 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 FRMPD4Q14CM0 1322 aa7.7□□□□□ -1.18
TMEM116-208ENST00000549537 REV3LO60673 3130 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 SLC35F4A4IF30 521 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 FIGNL2A6NMB9 653 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 B4DLN1 442 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 B4GALT4O60513 344 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 EIF3JO75822 258 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 CFBP00751 764 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 TXNP10599 105 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 RAG1P15918 1043 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 EIF2AK2P19525 551 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 SMARCA1P28370 1054 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 HOXA13P31271 388 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 MCM5P33992 734 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 LIFRP42702 1097 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 CPT1AP50416 773 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 MRPL12P52815 198 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 FPGSQ05932 587 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 TTLL4Q14679 1199 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 STXBP2Q15833 593 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 LY6KQ17RY6 165 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 TSGA10IPQ3SY00 556 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 RASIP1Q5U651 963 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 HOMER1Q86YM7 354 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 DEFB123Q8N688 67 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 IL31RAQ8NI17 732 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 PDCD2LQ9BRP1 358 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 MTG1Q9BT17 334 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 NOC4LQ9BVI4 516 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 TRPV6Q9H1D0 765 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 ALDH8A1Q9H2A2 487 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 ANO2Q9NQ90 1003 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 DDX41Q9UJV9 622 aaKnown RBP7.69□□□□□ -1.18
TMEM116-208ENST00000549537 UMODL1Q5DID0 1318 aa7.69□□□□□ -1.18
TMEM116-208ENST00000549537 POM121CA8CG34 1229 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 TLR3O15455 904 aaKnown RBP7.68□□□□□ -1.18
TMEM116-208ENST00000549537 KPNA6O60684 536 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 CDC45O75419 566 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 PLEKHA8P1O95397 391 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 MMP3P08254 477 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 MYL3P08590 195 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 HOXD8P13378 290 aaPredicted RBP7.68□□□□□ -1.18
TMEM116-208ENST00000549537 CYP2C18P33260 490 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 SMAD3P84022 425 aaKnown RBP7.68□□□□□ -1.18
TMEM116-208ENST00000549537 EXOSC10Q01780 885 aaKnown RBP7.68□□□□□ -1.18
TMEM116-208ENST00000549537 PGM5Q15124 567 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 TMEM240Q5SV17 173 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 ARHGEF16Q5VV41 709 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 CASC1Q6TDU7 716 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 SEPT14Q6ZU15 432 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 VSIG10LQ86VR7 867 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 SGMS1Q86VZ5 419 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 TMTC2Q8N394 836 aa7.68□□□□□ -1.18
TMEM116-208ENST00000549537 SRBD1Q8N5C6 995 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms