RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 XBP1P17861 261 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 FECHP22830 423 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 KIF5BP33176 963 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 GNAQP50148 359 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 ANTXR2P58335 489 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 DEFB103AP81534 67 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 CLUL1Q15846 466 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 RTN1Q16799 776 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 IRF7Q92985 503 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 CCDC17Q96LX7 622 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 SEZ6LQ9BYH1 1024 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 ACAD9Q9H845 621 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 SUGCTQ9HAC7 445 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 LY9Q9HBG7 655 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 RNF146Q9NTX7 359 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 LMCD1Q9NZU5 365 aa8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-208ENST00000549341 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 CDK5RAP2Q96SN8 1893 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 LINC01553A4QN01 128 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 ASB14A6NK59 587 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 IQCF3P0C7M6 154 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 NKX3-2P78367 333 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 IKQ13123 557 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 ATL3Q6DD88 541 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 APOA5Q6Q788 366 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 DGKHQ86XP1 1220 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 PRPF38AQ8NAV1 312 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 NSUN7Q8NE18 718 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 CHST13Q8NET6 341 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 CTCFLQ8NI51 663 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 HPS1Q92902 700 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 SLC38A10Q9HBR0 1119 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 A1CFQ9NQ94 594 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 ORC3Q9UBD5 711 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 FAM50BQ9Y247 325 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 SMCHD1A6NHR9 2005 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 GBF1Q92538 1859 aa8.13□□□□□ -1.11
DEPDC4-208ENST00000549341 NCOR2Q9Y618 2525 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MYO15AQ9UKN7 3530 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 PTPRZ1P23471 2315 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 STK36Q9NRP7 1315 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 F5H6K3 240 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 ATP2A1O14983 1001 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 TRAK2O60296 914 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MBD3O95983 291 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 KRT85P78386 507 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 PURAQ00577 322 aaKnown RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 TFAP4Q01664 338 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 KLRC3Q07444 240 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 BFSP2Q13515 415 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 SAFBQ15424 915 aaKnown RBP eCLIP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 NBPF20Q3BBV1 942 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 ADHFE1Q8IWW8 467 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 SUGP1Q8IWZ8 645 aaKnown RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 ZNF654Q8IZM8 581 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 OR6J1Q8NGC5 347 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 KCNV2Q8TDN2 545 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 SYAP1Q96A49 352 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 C8orf76Q96K31 380 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 C17orf80Q9BSJ5 609 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MTG1Q9BT17 334 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 CFAP45Q9UL16 551 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MTMR6Q9Y217 621 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 ZNF318Q5VUA4 2279 aa8.12□□□□□ -1.11
DEPDC4-208ENST00000549341 MYH1P12882 1939 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 NID2Q14112 1375 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 BAZ2AQ9UIF9 1905 aaKnown RBP8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 CACNA1GO43497 2377 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 JAK2O60674 1132 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 PRDM1O75626 825 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 GJB5O95377 273 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 DEXIO95424 95 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 ALAS1P13196 640 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 IFNAR1P17181 557 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 IRS1P35568 1242 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 CPT1AP50416 773 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 MMP16P51512 607 aa8.11□□□□□ -1.11
DEPDC4-208ENST00000549341 SNAP25P60880 206 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms