RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 GJB5O95377 273 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 RPLP2P05387 115 aaKnown RBP21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 CTSHP09668 335 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 SLC26A2P50443 739 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 STAT5BP51692 787 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 TAP1Q03518 808 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 MKRN4PQ13434 485 aaPredicted RBP21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 MARCH8Q5T0T0 291 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 RSPH3Q86UC2 560 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 SEPT8Q92599 483 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 RAD9AQ99638 391 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 TUBE1Q9UJT0 475 aa21.22■□□□□ 0.99
CHMP1A-207ENST00000549328 IGKV6D-21A0A0A0MT36 114 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 IPO5O00410 1097 aaKnown RBP21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 CPLX1O14810 134 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 ADAMTS3O15072 1205 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 INSRRP14616 1297 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 IGFBP4P22692 258 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 SETQ01105 290 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 CPLX2Q6PUV4 134 aaKnown RBP21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 FAM177A1Q8N128 213 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 TBC1D22BQ9NU19 505 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 PDRG1Q9NUG6 133 aa21.21■□□□□ 0.99
CHMP1A-207ENST00000549328 PTPRSQ13332 1948 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 DHX15O43143 795 aaKnown RBP21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 PPFIA3O75145 1194 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 POU3F3P20264 500 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 CIITAP33076 1130 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 ANAPC15P60006 121 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 ABHD15Q6UXT9 468 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 RUFY4Q6ZNE9 571 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 USP38Q8NB14 1042 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 APBB2Q92870 758 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 VPS54Q9P1Q0 977 aa21.2■□□□□ 0.98
CHMP1A-207ENST00000549328 DEXIO95424 95 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 CCNE2O96020 404 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 CHRNA1P02708 482 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 AMHP03971 560 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 PLCB4Q15147 1175 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 TMCO2Q7Z6W1 182 aaPredicted RBP21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 ZNF577Q9BSK1 485 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 TRPC6Q9Y210 931 aa21.19■□□□□ 0.98
CHMP1A-207ENST00000549328 EIF5BO60841 1220 aaKnown RBP21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 ARHGEF15O94989 841 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 USP11P51784 963 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 NLRP5P59047 1200 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 FAM160B1Q5W0V3 765 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 RASGRP4Q8TDF6 673 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 DNAJB3Q8WWF6 145 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 IFIH1Q9BYX4 1025 aaKnown RBP21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 C22orf23Q9BZE7 217 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 OSBPL7Q9BZF2 842 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 INSL6Q9Y581 213 aa21.18■□□□□ 0.98
CHMP1A-207ENST00000549328 CUL9Q8IWT3 2517 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 POTEB3A0JP26 581 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 LCHNA4D1U4 455 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 DDX39AO00148 427 aaKnown RBP21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 IGBP1P78318 339 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 MGAT3Q09327 533 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 ZNF746Q6NUN9 644 aaPredicted RBP21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 MIS18BP1Q6P0N0 1132 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 POTEBQ6S5H4 581 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 ARNTL2Q8WYA1 636 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 LARP6Q9BRS8 491 aaKnown RBP21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 CERS4Q9HA82 394 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 PCDHA2Q9Y5H9 948 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 MICAL3Q7RTP6 2002 aa21.17■□□□□ 0.98
CHMP1A-207ENST00000549328 BACH1O14867 736 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 HBP1O60381 514 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 HTRA4P83105 476 aaPredicted RBP21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 PRR16Q569H4 304 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 IER5Q5VY09 327 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 GALNT17Q6IS24 598 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 SMAP1Q8IYB5 467 aaPredicted RBP21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 MYOCDQ8IZQ8 938 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 PPM1EQ8WY54 764 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 TOP1MTQ969P6 601 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 PCDHA4Q9UN74 947 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 SQORQ9Y6N5 450 aa21.16■□□□□ 0.98
CHMP1A-207ENST00000549328 GTPBP6O43824 516 aaPredicted RBP21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 CDKL5O76039 1030 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 MRPS6P82932 125 aaKnown RBP21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 KRT76Q01546 638 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 STK3Q13188 491 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 FAM117BQ6P1L5 589 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 CCDC60Q8IWA6 550 aaPredicted RBP21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 ATP8B4Q8TF62 1192 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 LENG9Q96B70 501 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 IL17RAQ96F46 866 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 ZNF302Q9NR11 478 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 TCEAL9Q9UHQ7 104 aa21.15■□□□□ 0.98
CHMP1A-207ENST00000549328 TRANK1O15050 2925 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 SMIM35A0A1B0GVV1 85 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 LINC01553A4QN01 128 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 EPOPA6NHQ4 379 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 RFXAPO00287 272 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms