RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, human

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB2-215	ENST00000549220	MAP2K2	P36507	400 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GRIK1	P39086	918 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MAP2K1	Q02750	393 aa	Predicted RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FAAP100	Q0VG06	881 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	RRP1B	Q14684	758 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	RAB3GAP1	Q15042	981 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZYX	Q15942	572 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MAP3K11	Q16584	847 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CCL15	Q16663	113 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GADL1	Q6ZQY3	521 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	TTC6	Q86TZ1	520 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ERO1B	Q86YB8	467 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SCYL3	Q8IZE3	742 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	STRBP	Q96SI9	672 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	NAPB	Q9H115	298 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SEMA6C	Q9H3T2	930 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	TUT1	Q9H6E5	874 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	DNAJC18	Q9H819	358 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	NPHS2	Q9NP85	383 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FAM105A	Q9NUU6	356 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	PPP4R2	Q9NY27	417 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	HERC5	Q9UII4	1024 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SERPINB13	Q9UIV8	391 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MTMR7	Q9Y216	660 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZHX2	Q9Y6X8	837 aa		6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.99	□□□□□ -1.29
EFCAB2-215	ENST00000549220	RLF	Q13129	1914 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FAM170B	A6NMN3	283 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GSG1L2	A8MUP6	293 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	DYNC1LI2	O43237	492 aa	Predicted RBP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	IGSF3	O75054	1194 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	PRDM1	O75626	825 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	TBC1D8	O95759	1140 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GH2	P01242	217 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	IRAK1	P51617	712 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ATP2B2	Q01814	1243 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SREBF2	Q12772	1141 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	POU4F3	Q15319	338 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CERKL	Q49MI3	558 aa	Predicted RBP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MCMDC2	Q4G0Z9	681 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	VPS53	Q5VIR6	699 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CTR9	Q6PD62	1173 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	TMED8	Q6PL24	325 aa	Predicted RBP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	IFNL3	Q8IZI9	196 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ABI1	Q8IZP0	508 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	JMY	Q8N9B5	988 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CHMP4C	Q96CF2	233 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	NACAP1	Q9BZK3	213 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	TOMM22	Q9NS69	142 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ATP8A2	Q9NTI2	1148 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CCDC39	Q9UFE4	941 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	PCDHGC5	Q9Y5F6	944 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MCM3AP	O60318	1980 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CCDC171	Q6TFL3	1326 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SYNGAP1	Q96PV0	1343 aa		6.98	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MANSC4	A6NHS7	340 aa	Predicted RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CTNND1	O60716	968 aa	Known RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	BRD1	O95696	1058 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZBTB48	P10074	688 aa	Predicted RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GNAT2	P19087	354 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SHMT1	P34896	483 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CAP2	P40123	477 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	GTF2A2	P52657	109 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	LBX1	P52954	281 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	HAND2	P61296	217 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	JAG1	P78504	1218 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	PPIL2	Q13356	520 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	SNAPC2	Q13487	334 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	NFKBIB	Q15653	356 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ABCB5	Q2M3G0	1257 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	RRP12	Q5JTH9	1297 aa	Known RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FBXL6	Q8N531	539 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	FEZ1	Q99689	392 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	WDR18	Q9BV38	432 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	MKNK2	Q9HBH9	465 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	CABP5	Q9NP86	173 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	HELLS	Q9NRZ9	838 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	RNF186	Q9NXI6	227 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ARPP21	Q9UBL0	812 aa	Predicted RBP	6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZNF112	Q9UJU3	913 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	BRPF3	Q9ULD4	1205 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	ZBTB21	Q9ULJ3	1066 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	PPP1R9A	Q9ULJ8	1098 aa		6.97	□□□□□ -1.29
EFCAB2-215	ENST00000549220	KRTAP4-8	A0A0G2JLE6	195 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	HIP1	O00291	1037 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	ASNS	P08243	561 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	NFIC	P08651	508 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	CETP	P11597	493 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	AKR1B1	P15121	316 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	CDK8	P49336	464 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	HMGCS2	P54868	508 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	MFAP1	P55081	439 aa	Known RBP	6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	PPAT	Q06203	517 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	SPP2	Q13103	211 aa		6.96	□□□□□ -1.3
EFCAB2-215	ENST00000549220	SEPT2	Q15019	361 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms