RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 NAA35Q5VZE5 725 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 ADAT2Q7Z6V5 191 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 ANO3Q9BYT9 981 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 TRIM31Q9BZY9 425 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 SERPINB2P05120 415 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 MYBP10242 640 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 SEC24CP53992 1094 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 NFIAQ12857 509 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZNF572Q7Z3I7 529 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 SH3GL2Q99962 352 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 IL1R1P14778 569 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 CASP4P49662 377 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 TNNC1P63316 161 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 KCNA1Q09470 495 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 ARSHQ5FYA8 562 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 ALKBH5Q6P6C2 394 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZFPM1Q8IX07 1006 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 PLAAQ9Y263 795 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 ERLIN2O94905 339 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 UCHL3P15374 230 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 RBM5P52756 815 aaKnown RBP eCLIP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 TBC1D22AQ8WUA7 517 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 CAVIN3Q969G5 261 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 DHX36Q9H2U1 1008 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-219ENST00000549151 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GCNT3O95395 438 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GNA14O95837 355 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 HOXA13P31271 388 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 SHMT1P34896 483 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GBP6Q6ZN66 633 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 INPP4AQ96PE3 977 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 PPANQ9NQ55 473 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 BACH1O14867 736 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 CHMP2AO43633 222 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 NR1D1P20393 614 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 FBXW10Q5XX13 1052 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 GANQ9H2C0 597 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
RAPGEF3-219ENST00000549151 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 H0YHG0 523 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 GFPT2O94808 682 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 ABCB4P21439 1286 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 INPP5BP32019 993 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 GABPAQ06546 454 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 SF3A3Q12874 501 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 ODF2Q5BJF6 829 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 RNF187Q5TA31 235 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 UBLCP1Q8WVY7 318 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 DNM3Q9UQ16 869 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 GAKO14976 1311 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 AKAP3O75969 853 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 KIF4AO95239 1232 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 AFPP02771 609 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZNF76P36508 570 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 IQCKQ8N0W5 287 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 CYP2W1Q8TAV3 490 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 PIGOQ8TEQ8 1089 aa13.05□□□□□ -0.32
RAPGEF3-219ENST00000549151 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms