RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 APOA5Q6Q788 366 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 SERINC5Q86VE9 423 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 SGMS1Q86VZ5 419 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 SENP7Q9BQF6 1050 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
SCAF11-211ENST00000547950 FRMPD4Q14CM0 1322 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 ABHD14A-ACY1A0A1B0GW23 586 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 SMCO2A6NFE2 343 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GOLGA8AA7E2F4 631 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GOLGA8BA8MQT2 603 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 SMAPO00193 183 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 LGR5O75473 907 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 CXCL10P02778 98 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 CTSHP09668 335 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GNAT1P11488 350 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 MARK3P27448 753 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 ADD1P35611 737 aaKnown RBP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 TCF7P36402 384 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 DEFB103AP81534 67 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 ARHGAP4P98171 946 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 TAP1Q03518 808 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 RBL2Q08999 1139 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 MTMR1Q13613 665 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 MBTPS1Q14703 1052 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 WWC2Q6AWC2 1192 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GIMAP8Q8ND71 665 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 DBF4BQ8NFT6 615 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 CYP2W1Q8TAV3 490 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 SEPT1Q8WYJ6 367 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GLG1Q92896 1179 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 GPRASP2Q96D09 838 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 CDHR1Q96JP9 859 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 PGBD1Q96JS3 809 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 ZNF215Q9UL58 517 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-211ENST00000547950 UBIAD1Q9Y5Z9 338 aa7.68□□□□□ -1.18
SCAF11-211ENST00000547950 LRRC37A2A6NM11 1700 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 GSTTP1A0A1W2PQM5 241 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 EPOPA6NHQ4 379 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 EFCAB14O75071 495 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 HMGB1P09429 215 aaKnown RBP7.67□□□□□ -1.18
SCAF11-211ENST00000547950 KCNA2P16389 499 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 CDC27P30260 824 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 ADCY7P51828 1080 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 KRT40Q6A162 431 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 SPRED2Q7Z698 418 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
SCAF11-211ENST00000547950 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
SCAF11-211ENST00000547950 RAD9AQ99638 391 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 OSBPL7Q9BZF2 842 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 RIC8AQ9NPQ8 531 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 JADE2Q9NQC1 790 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 FAM217BQ9NTX9 383 aaPredicted RBP7.67□□□□□ -1.18
SCAF11-211ENST00000547950 TMEM260Q9NX78 707 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 MTUS1Q9ULD2 1270 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 LCTP09848 1927 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 EMSYQ7Z589 1322 aa7.67□□□□□ -1.18
SCAF11-211ENST00000547950 STXBP3O00186 592 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 MAFGO15525 162 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 UPP2O95045 317 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 GJB5O95377 273 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 FOSP01100 380 aaPredicted RBP7.66□□□□□ -1.18
SCAF11-211ENST00000547950 AMHP03971 560 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 ARP10275 920 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 HOXC8P31273 242 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 HSPA4P34932 840 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 ZNF76P36508 570 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 METAP2P50579 478 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCAF11-211ENST00000547950 PRSS12P56730 875 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 IGBP1P78318 339 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 MRPS5P82675 430 aaKnown RBP7.66□□□□□ -1.18
SCAF11-211ENST00000547950 FUT2Q10981 343 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 PPFIA1Q13136 1202 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 GRB10Q13322 594 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 JAKMIP3Q5VZ66 844 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 BLOC1S2Q6QNY1 142 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 RUFY4Q6ZNE9 571 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 Q6ZUG5 572 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 MYOCDQ8IZQ8 938 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 ATXN2LQ8WWM7 1075 aaKnown RBP7.66□□□□□ -1.18
SCAF11-211ENST00000547950 SEPT8Q92599 483 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 BRF1Q92994 677 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 ASB2Q96Q27 587 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 UIMC1Q96RL1 719 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 MXRA8Q9BRK3 442 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 SMARCAD1Q9H4L7 1026 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 KCNH7Q9NS40 1196 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 ERAP1Q9NZ08 941 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 THEGQ9P2T0 379 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms