RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CCPG1Q9ULG6 757 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 MKL2Q9ULH7 1088 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 CPLX1O14810 134 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 ZBTB5O15062 677 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 PFKFB2O60825 505 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CDKL5O76039 1030 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SMARCA1P28370 1054 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 COPB2P35606 906 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CTCFP49711 727 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 MCM2P49736 904 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CCT2P78371 535 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 LACTBP83111 547 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SP3Q02447 781 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 ST3GAL1Q11201 340 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 OCLNQ16625 522 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 ME3Q16798 604 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CPLX2Q6PUV4 134 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SYT9Q86SS6 491 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 CMTR1Q8N1G2 835 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SHCBP1Q8NEM2 672 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 ZNF296Q8WUU4 475 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 VTI1AQ96AJ9 217 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 MTMR8Q96EF0 704 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 RRP36Q96EU6 259 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 PIGSQ96S52 555 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SLC30A3Q99726 388 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 MOV10L1Q9BXT6 1211 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 PORCNQ9H237 461 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 RIOX1Q9H6W3 641 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 JMJD4Q9H9V9 463 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 RAVER2Q9HCJ3 691 aaKnown RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 SH2B1Q9NRF2 756 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-211ENST00000546304 HOMER2Q9NSB8 354 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 LIMCH1Q9UPQ0 1083 aa7.31□□□□□ -1.24
PRKDC-211ENST00000546304 STK36Q9NRP7 1315 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 FRMPD3Q5JV73 1810 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 PNMA6FA0A0J9YX94 578 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 hCG_1642624A0A1W2PR95 340 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 TNPO2O14787 897 aaKnown RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 PPP1R11O60927 126 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 FKTNO75072 461 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 SLC25A27O95847 323 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 IFNAR1P17181 557 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ERCC3P19447 782 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 AMPD1P23109 780 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 MAPK4P31152 587 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 STAT3P40763 770 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 FCGRTP55899 365 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 KIF22Q14807 665 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 NTRK3Q16288 839 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 USH1GQ495M9 461 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 WDR78Q5VTH9 848 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 NCAPG2Q86XI2 1143 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 FBXO11Q86XK2 927 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 CCDC82Q8N4S0 544 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 NECAB1Q8N987 351 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 PIBF1Q8WXW3 757 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 PHKBQ93100 1093 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ERO1AQ96HE7 468 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 AMNQ9BXJ7 453 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 SLC26A6Q9BXS9 759 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 RNF26Q9BY78 433 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 MROH8Q9H579 483 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ACAD9Q9H845 621 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 EFCC1Q9HA90 598 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
PRKDC-211ENST00000546304 VAT1LQ9HCJ6 419 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
PRKDC-211ENST00000546304 ABCB11O95342 1321 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 MYH7BA7E2Y1 1941 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ELOA3CA0A087WX78 387 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-211ENST00000546304 PTPDC1A2A3K4 754 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ELOA3DA6NLF2 546 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-211ENST00000546304 hCG_1984214I3L0E3 225 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 PIK3R2O00459 728 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 NFIBO00712 420 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ALAS1P13196 640 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 CTGFP29279 349 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 PSMC4P43686 418 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 DGKGP49619 791 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 LBX1P52954 281 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 CAP1Q01518 475 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 AKAP17AQ02040 695 aaKnown RBP7.29□□□□□ -1.24
PRKDC-211ENST00000546304 GRB14Q14449 540 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 TKFCQ3LXA3 575 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ELOA3BQ3SY89 546 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 TMEM164Q5U3C3 297 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 WWC2Q6AWC2 1192 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 CHSY3Q70JA7 882 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 HEATR3Q7Z4Q2 680 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms