RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 TUBP50607 506 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 TTC8Q8TAM2 541 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 PBKQ96KB5 322 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 ZFP69BQ9UJL9 534 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 TMCO1Q9UM00 188 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 PLCH2O75038 1416 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 TMEM120BA0PK00 339 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 PSMD7P51665 324 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 DPYDQ12882 1025 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 C1QTNF12Q5T7M4 302 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
SOD2-216ENST00000546260 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 MAP3K14Q99558 947 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 DCLRE1BQ9H816 532 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 WDR91A4D1P6 747 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 FAM205CA6NFA0 338 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 SNX3O60493 162 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 PRLRP16471 622 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 MARK3P27448 753 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 STRN3Q13033 797 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 HIPK4Q8NE63 616 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 P2RX5Q93086 422 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 CALML4Q96GE6 196 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 MAF1Q9H063 256 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 ZNF180Q9UJW8 692 aa11.2□□□□□ -0.62
SOD2-216ENST00000546260 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
SOD2-216ENST00000546260 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 CFAP69A5D8W1 941 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 A6NHS1 94 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 DCTN3O75935 186 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 MBD4O95243 580 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 RARAP10276 462 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 MYBPC3Q14896 1274 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 WDR59Q6PJI9 974 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 TRIM50Q86XT4 487 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 EPS8L3Q8TE67 593 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 CATSPER2Q96P56 530 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 RXFP1Q9HBX9 757 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 F8VZ95 297 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 CCDC188H7C350 402 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 THAP12O43422 761 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 STAMBPO95630 424 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 SLC12A6Q9UHW9 1150 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 PASKQ96RG2 1323 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 AGTP01019 485 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 PBX1P40424 430 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 SARSP49591 514 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 LONRF1Q17RB8 773 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 ISLR2Q6UXK2 745 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 APPBP2Q92624 585 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 ZNF594Q96JF6 807 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 LGR6Q9HBX8 967 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 CLIC5Q9NZA1 410 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 NKX1-2Q9UD57 310 aaPredicted RBP11.19□□□□□ -0.62
SOD2-216ENST00000546260 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 KNDC1Q76NI1 1749 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 AFF2P51816 1311 aa11.19□□□□□ -0.62
SOD2-216ENST00000546260 SRGNP10124 158 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 TMED2Q15363 201 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 GRAMD1BQ3KR37 738 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 METTL24Q5JXM2 366 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 RASSF3Q86WH2 238 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 MREGQ8N565 214 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 MARCH10Q8NA82 808 aaPredicted RBP11.18□□□□□ -0.62
SOD2-216ENST00000546260 FAM192AQ9GZU8 254 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 SUCLA2Q9P2R7 463 aaPredicted RBP11.18□□□□□ -0.62
SOD2-216ENST00000546260 SLC12A4Q9UP95 1085 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
SOD2-216ENST00000546260 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
SOD2-216ENST00000546260 SERPINB6P35237 376 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
SOD2-216ENST00000546260 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms