RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CHGBP05060 677 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
SNHG1-224ENST00000545688 NAT1P18440 290 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 JAM2P57087 298 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 ST5P78524 1137 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-224ENST00000545688 Q6ZUG5 572 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 ZC3H7AQ8IWR0 971 aaKnown RBP7.3□□□□□ -1.24
SNHG1-224ENST00000545688 NLGN4XQ8N0W4 816 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 PMFBP1Q8TBY8 1022 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 SLC52A2Q9HAB3 445 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
SNHG1-224ENST00000545688 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 KCNK3O14649 394 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 DNM2P50570 870 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 PPP2CBP62714 309 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 PPP2CAP67775 309 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 FIGNQ5HY92 759 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 ZC3H12BQ5HYM0 836 aaKnown RBP7.29□□□□□ -1.24
SNHG1-224ENST00000545688 ARHGEF18Q6ZSZ5 1173 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 TTC9BQ8N6N2 239 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 BORCS6Q96GS4 357 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 GPR20Q99678 358 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 ATP23Q9Y6H3 246 aa7.29□□□□□ -1.24
SNHG1-224ENST00000545688 INSRRP14616 1297 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 EPHB4P54760 987 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 CRY1Q16526 586 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 ZXDCQ2QGD7 858 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-224ENST00000545688 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 GPR155Q7Z3F1 870 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 RALYLQ86SE5 291 aaKnown RBP7.28□□□□□ -1.24
SNHG1-224ENST00000545688 GSTCDQ8NEC7 633 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 MKL1Q969V6 931 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 PTPN18Q99952 460 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
SNHG1-224ENST00000545688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-224ENST00000545688 NPEPPSL1A6NEC2 478 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 H0Y858 1186 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 RASGRP1O95267 797 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 ZNF20P17024 532 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 CSF2RBP32927 897 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
SNHG1-224ENST00000545688 SOGA3Q5TF21 947 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 EP400NLQ6ZTU2 488 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 CISD2Q8N5K1 135 aaKnown RBP7.27□□□□□ -1.25
SNHG1-224ENST00000545688 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 SLC7A14Q8TBB6 771 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 JADE2Q9NQC1 790 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 ARHGAP28Q9P2N2 729 aa7.27□□□□□ -1.25
SNHG1-224ENST00000545688 GSTA4O15217 222 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 GPR42O15529 346 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 EFCAB14O75071 495 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 C4BPAP04003 597 aaKnown RBP7.26□□□□□ -1.25
SNHG1-224ENST00000545688 GJA4P35212 333 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 CHST13Q8NET6 341 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 MEGF9Q9H1U4 602 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 COQ6Q9Y2Z9 468 aa7.26□□□□□ -1.25
SNHG1-224ENST00000545688 PRAMEF25A6NGN4 478 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 CNOT4O95628 575 aaKnown RBP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 LACTBP83111 547 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 PUM1Q14671 1186 aaKnown RBP eCLIP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 ICAM4Q14773 271 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 TRIM61Q5EBN2 209 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 CPZQ66K79 652 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 CIR1Q86X95 450 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 ZSWIM2Q8NEG5 633 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 THAP3Q8WTV1 239 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 SCLYQ96I15 445 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 DNAJC2Q99543 621 aaKnown RBP7.25□□□□□ -1.25
SNHG1-224ENST00000545688 C1QTNF3Q9BXJ4 246 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 SFMBT1Q9UHJ3 866 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 MYRFQ9Y2G1 1151 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
SNHG1-224ENST00000545688 CLASP2O75122 1294 aaKnown RBP7.24□□□□□ -1.25
SNHG1-224ENST00000545688 ZNF888P0CJ79 500 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-224ENST00000545688 PTGS1P23219 599 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 MC4RP32245 332 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 SEC23AQ15436 765 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 SLFN13Q68D06 897 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 FSTL4Q6MZW2 842 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-224ENST00000545688 KATNBL1Q9H079 304 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 PTPN22Q9Y2R2 807 aa7.24□□□□□ -1.25
SNHG1-224ENST00000545688 AOAHP28039 575 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 TM4SF20Q53R12 229 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 C2orf27AQ580R0 203 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 NOSTRINQ8IVI9 506 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 LILRB2Q8N423 598 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 CELF4Q9BZC1 486 aaKnown RBP7.23□□□□□ -1.25
SNHG1-224ENST00000545688 OSBPL2Q9H1P3 480 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 CD248Q9HCU0 757 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 INCENPQ9NQS7 918 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms