RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
RTN3-214ENST00000545432 RIF1Q5UIP0 2472 aaKnown RBP17.03■□□□□ 0.32
RTN3-214ENST00000545432 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 RPLP2P05387 115 aaKnown RBP17.03■□□□□ 0.32
RTN3-214ENST00000545432 AVPR2P30518 371 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
RTN3-214ENST00000545432 RSPH3Q86UC2 560 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 KLHL23Q8NBE8 558 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 POF1BQ8WVV4 589 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 PIGSQ96S52 555 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 FTHL17Q9BXU8 183 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 OSBPL3Q9H4L5 887 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 CNNM2Q9H8M5 875 aa17.03■□□□□ 0.32
RTN3-214ENST00000545432 KCNC3Q14003 757 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 GRM4Q14833 912 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 GIMAP8Q8ND71 665 aaPredicted RBP17.02■□□□□ 0.32
RTN3-214ENST00000545432 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 CDY2AQ9Y6F7 541 aa17.02■□□□□ 0.32
RTN3-214ENST00000545432 GSTTP1A0A1W2PQM5 241 aa17.01■□□□□ 0.31
RTN3-214ENST00000545432 GFRA3O60609 400 aa17.01■□□□□ 0.31
RTN3-214ENST00000545432 VCPP55072 806 aaKnown RBP17.01■□□□□ 0.31
RTN3-214ENST00000545432 UBE3AQ05086 875 aa17.01■□□□□ 0.31
RTN3-214ENST00000545432 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
RTN3-214ENST00000545432 DNAJB3Q8WWF6 145 aa17.01■□□□□ 0.31
RTN3-214ENST00000545432 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
RTN3-214ENST00000545432 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
RTN3-214ENST00000545432 CFAP54Q96N23 3096 aa17■□□□□ 0.31
RTN3-214ENST00000545432 FSD2A1L4K1 749 aa17■□□□□ 0.31
RTN3-214ENST00000545432 PIK3CDO00329 1044 aa17■□□□□ 0.31
RTN3-214ENST00000545432 KCNA2P16389 499 aa17■□□□□ 0.31
RTN3-214ENST00000545432 CD52P31358 61 aa17■□□□□ 0.31
RTN3-214ENST00000545432 TCF7P36402 384 aaPredicted RBP17■□□□□ 0.31
RTN3-214ENST00000545432 NRIP1P48552 1158 aa17■□□□□ 0.31
RTN3-214ENST00000545432 MRPS6P82932 125 aaKnown RBP17■□□□□ 0.31
RTN3-214ENST00000545432 TROAPQ12815 778 aa17■□□□□ 0.31
RTN3-214ENST00000545432 PPFIA1Q13136 1202 aa17■□□□□ 0.31
RTN3-214ENST00000545432 GRIK4Q16099 956 aa17■□□□□ 0.31
RTN3-214ENST00000545432 IMMTQ16891 758 aaKnown RBP17■□□□□ 0.31
RTN3-214ENST00000545432 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
RTN3-214ENST00000545432 KMT2EQ8IZD2 1858 aa17■□□□□ 0.31
RTN3-214ENST00000545432 SEPT1Q8WYJ6 367 aa17■□□□□ 0.31
RTN3-214ENST00000545432 CDCA3Q99618 268 aaPredicted RBP17■□□□□ 0.31
RTN3-214ENST00000545432 S1PR5Q9H228 398 aa17■□□□□ 0.31
RTN3-214ENST00000545432 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
RTN3-214ENST00000545432 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
RTN3-214ENST00000545432 BARX2Q9UMQ3 279 aaPredicted RBP17■□□□□ 0.31
RTN3-214ENST00000545432 LAMA4Q16363 1823 aa17■□□□□ 0.31
RTN3-214ENST00000545432 KDM3AQ9Y4C1 1321 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 MEIS2O14770 477 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 ATP9AO75110 1047 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 STAG3L1P0CL83 205 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 VN1R2Q8NFZ6 395 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 GPRASP2Q96D09 838 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 FAM186AA6NE01 2351 aa16.99■□□□□ 0.31
RTN3-214ENST00000545432 IGSF9BQ9UPX0 1349 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
RTN3-214ENST00000545432 KAT6AQ92794 2004 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 FSCN2O14926 492 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 IER5Q5VY09 327 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 HOMER1Q86YM7 354 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 PADI3Q9ULW8 664 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 SPTBN4Q9H254 2564 aa16.98■□□□□ 0.31
RTN3-214ENST00000545432 DUSP6Q16828 381 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 PDE12Q6L8Q7 609 aaKnown RBP16.97■□□□□ 0.31
RTN3-214ENST00000545432 CWC27Q6UX04 472 aaKnown RBP16.97■□□□□ 0.31
RTN3-214ENST00000545432 RBM23Q86U06 439 aaKnown RBP16.97■□□□□ 0.31
RTN3-214ENST00000545432 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 CDHR1Q96JP9 859 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 RPGRIP1Q96KN7 1286 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 RIPOR3Q96MK2 946 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 PCYT2Q99447 389 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 SMARCAD1Q9H4L7 1026 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 TLE6Q9H808 572 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 FAM86C1Q9NVL1 165 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
RTN3-214ENST00000545432 HIP1O00291 1037 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 MAFGO15525 162 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 SCG2P13521 617 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 INSRRP14616 1297 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 ITGB5P18084 799 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 SMARCA1P28370 1054 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 SMC5Q8IY18 1101 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 MAP3K14Q99558 947 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 TMX1Q9H3N1 280 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 PCDHA2Q9Y5H9 948 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 TRPV2Q9Y5S1 764 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 UBIAD1Q9Y5Z9 338 aa16.96■□□□□ 0.31
RTN3-214ENST00000545432 MYO15AQ9UKN7 3530 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
RTN3-214ENST00000545432 NBL1P41271 181 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 SARSP49591 514 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms