RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 EIF5BO60841 1220 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 CT47B1P0C2W7 299 aaPredicted RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 ZNF853P0CG23 659 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 GNA15P30679 374 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 PICALMQ13492 652 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 GPNMBQ14956 572 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 CAVIN4Q5BKX8 364 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 TMEM214Q6NUQ4 689 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 CNKSR3Q6P9H4 555 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 WDR66Q8TBY9 1149 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.19□□□□□ -1.1
LDHA-223ENST00000545215 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 HERC5Q9UII4 1024 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 RAI2Q9Y5P3 530 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 CNOT1A5YKK6 2376 aaKnown RBP8.19□□□□□ -1.1
LDHA-223ENST00000545215 MROH5Q6ZUA9 1318 aa8.19□□□□□ -1.1
LDHA-223ENST00000545215 C5orf67F2Z3F1 127 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 TM4SF5O14894 197 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 GRM6O15303 877 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 EFCAB14O75071 495 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 DDX58O95786 925 aaKnown RBP8.18□□□□□ -1.1
LDHA-223ENST00000545215 GLP2RO95838 553 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 TIMP2P16035 220 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 PCSK2P16519 638 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 SMPD1P17405 629 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
LDHA-223ENST00000545215 PSMC6P62333 389 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
LDHA-223ENST00000545215 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 NT5DC4Q86YG4 428 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 C1orf210Q8IVY1 113 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 GPR152Q8TDT2 470 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 MAP4K1Q92918 833 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
LDHA-223ENST00000545215 BARX2Q9UMQ3 279 aaPredicted RBP8.18□□□□□ -1.1
LDHA-223ENST00000545215 NR2E1Q9Y466 385 aa8.18□□□□□ -1.1
LDHA-223ENST00000545215 RB1P06400 928 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 VCAM1P19320 739 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 PRDX5P30044 214 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 GPC1P35052 558 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 CASP7P55210 303 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 SLFN5Q08AF3 891 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 ORC1Q13415 861 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 ACVR2BQ13705 512 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
LDHA-223ENST00000545215 TCTN1Q2MV58 587 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 ZNF528Q3MIS6 628 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 CCDC30Q5VVM6 783 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 C19orf48Q6RUI8 117 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 MAMDC4Q6UXC1 1216 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 C8orf58Q8NAV2 365 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 RNF34Q969K3 372 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 EPC1Q9H2F5 836 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 ERVK-5Q9HDB9 667 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 CNNM1Q9NRU3 951 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 HOXC10Q9NYD6 342 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 SMG5Q9UPR3 1016 aaKnown RBP8.17□□□□□ -1.1
LDHA-223ENST00000545215 TANC1Q9C0D5 1861 aa8.17□□□□□ -1.1
LDHA-223ENST00000545215 DOPEY1Q5JWR5 2465 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 TGFBR3LH3BV60 316 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 J3QL48 77 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 EIF1AYO14602 144 aaKnown RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 MICAL2O94851 1124 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 SP100P23497 879 aaPredicted RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 FOXC1Q12948 553 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 BFSP2Q13515 415 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 IKBKEQ14164 716 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 COG2Q14746 738 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 SHROOM1Q2M3G4 852 aaPredicted RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 TRMT2AQ8IZ69 625 aaKnown RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 MAML2Q8IZL2 1156 aaPredicted RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 PPP2R3CQ969Q6 453 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 MMP19Q99542 508 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 C11orf84Q9BUA3 381 aaPredicted RBP8.16□□□□□ -1.1
LDHA-223ENST00000545215 DNAJC25Q9H1X3 360 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 FAM13BQ9NYF5 915 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 MAP3K2Q9Y2U5 619 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 ASTN1O14525 1302 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 AKAP13Q12802 2813 aa8.16□□□□□ -1.1
LDHA-223ENST00000545215 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 TBC1D4O60343 1298 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 CXCL10P02778 98 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 ZNF76P36508 570 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 PLA2G4AP47712 749 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
LDHA-223ENST00000545215 USP14P54578 494 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 SPEM2Q0P670 501 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 CAMK1Q14012 370 aa8.15□□□□□ -1.1
LDHA-223ENST00000545215 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms