RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDX47-212ENST00000545038 LSM14BQ9BX40 385 aaKnown RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 TRIM31Q9BZY9 425 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 TANGO6Q9C0B7 1094 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 CUEDC2Q9H467 287 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ATP8A1Q9Y2Q0 1164 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ZNF142P52746 1687 aaPredicted RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 ABCB11O95342 1321 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 PCDH11XQ9BZA7 1347 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 PCDH11YQ9BZA8 1340 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 LAMB1P07942 1786 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 STXBP3O00186 592 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 CES2O00748 559 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 EDIL3O43854 480 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 GSTA1P08263 222 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 PRPHP41219 470 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 MMP13P45452 471 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ZKSCAN8Q15776 578 aaPredicted RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 TRPM8Q7Z2W7 1104 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ZNF571Q7Z3V5 609 aaPredicted RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 GUF1Q8N442 669 aaKnown RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 KIF2BQ8N4N8 673 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 SYN2Q92777 582 aaPredicted RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 CENPTQ96BT3 561 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 SPAG5Q96R06 1193 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■□□□ 12.9
DDX47-212ENST00000545038 IL17RBQ9NRM6 502 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 KRIT1O00522 736 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ASAP2O43150 1006 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 KRT16P08779 473 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 OR52Z1P0C646 297 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 LINGO3P0C6S8 592 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ACTN1P12814 892 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 GYG1P46976 350 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 LETM2Q2VYF4 491 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 DCAF12L1Q5VU92 463 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 IRF2BP2Q7Z5L9 587 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 CEP120Q8N960 986 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ZBTB10Q96DT7 871 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 PRMT1Q99873 361 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 BRIP1Q9BX63 1249 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 EDEM3Q9BZQ6 932 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 GANQ9H2C0 597 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 MAGEF1Q9HAY2 307 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 TRIM33Q9UPN9 1127 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 STXBP5LQ9Y2K9 1186 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 FAM170AA1A519 330 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ANKRD33BA6NCL7 494 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 SMIM23A6NLE4 172 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 PGRMC1O00264 195 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 CCNT1O60563 726 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 OAS1P00973 400 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 KLHL30Q0D2K2 578 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ITIH4Q14624 930 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 THEMIS2Q5TEJ8 643 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 UNC13DQ70J99 1090 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 HEATR3Q7Z4Q2 680 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 RASGEF1CQ8N431 466 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ANKLE1Q8NAG6 615 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 AK8Q96MA6 479 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 SH3GLB2Q9NR46 395 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 TCP11L1Q9NUJ3 509 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 AIPL1Q9NZN9 384 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 MAD2L2Q9UI95 211 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 AJAP1Q9UKB5 411 aaPredicted RBP8.65□□□□□ -1.02
DDX47-212ENST00000545038 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.02
DDX47-212ENST00000545038 A0A0G2JS52 829 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 KLHL33A6NCF5 533 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 IGF2BP3O00425 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
DDX47-212ENST00000545038 IFNAR2P48551 515 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 LRRC63Q05C16 580 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 MTMR3Q13615 1198 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 ECM1Q16610 540 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 GALNTL6Q49A17 601 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 CAPRIN2Q6IMN6 1127 aaKnown RBP8.64□□□□□ -1.03
DDX47-212ENST00000545038 DAGLBQ8NCG7 672 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 SPDYE1Q8NFV5 336 aaPredicted RBP8.64□□□□□ -1.03
DDX47-212ENST00000545038 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 OLIG1Q8TAK6 271 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 RBM46Q8TBY0 533 aaKnown RBP8.64□□□□□ -1.03
DDX47-212ENST00000545038 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 GLG1Q92896 1179 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
DDX47-212ENST00000545038 SELENOSQ9BQE4 189 aa8.64□□□□□ -1.03
DDX47-212ENST00000545038 CNOT10Q9H9A5 744 aaKnown RBP8.64□□□□□ -1.03
DDX47-212ENST00000545038 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms