RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDX55-212ENST00000544738 COL9A3Q14050 684 aaPredicted RBP18.61■□□□□ 0.57
DDX55-212ENST00000544738 HIC1Q14526 733 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
DDX55-212ENST00000544738 MICU3Q86XE3 530 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 ZFP91Q96JP5 570 aaPredicted RBP18.61■□□□□ 0.57
DDX55-212ENST00000544738 IFIH1Q9BYX4 1025 aaKnown RBP18.61■□□□□ 0.57
DDX55-212ENST00000544738 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
DDX55-212ENST00000544738 GRM6O15303 877 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 SORBS3O60504 671 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
DDX55-212ENST00000544738 ZXDAP98168 799 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
DDX55-212ENST00000544738 APOA5Q6Q788 366 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 NLRX1Q86UT6 975 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
DDX55-212ENST00000544738 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 FBXL6Q8N531 539 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 FIBCD1Q8N539 461 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
DDX55-212ENST00000544738 IL17RAQ96F46 866 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 USP26Q9BXU7 913 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 RTEL1Q9NZ71 1219 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 MICAL3Q7RTP6 2002 aa18.6■□□□□ 0.57
DDX55-212ENST00000544738 NOP56O00567 594 aaKnown RBP18.59■□□□□ 0.57
DDX55-212ENST00000544738 LINC01565O15544 149 aa18.59■□□□□ 0.57
DDX55-212ENST00000544738 METTL7BQ6UX53 244 aa18.59■□□□□ 0.57
DDX55-212ENST00000544738 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
DDX55-212ENST00000544738 SENP7Q9BQF6 1050 aa18.59■□□□□ 0.57
DDX55-212ENST00000544738 C16orf70Q9BSU1 422 aa18.59■□□□□ 0.57
DDX55-212ENST00000544738 RIF1Q5UIP0 2472 aaKnown RBP18.58■□□□□ 0.57
DDX55-212ENST00000544738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.58■□□□□ 0.56
DDX55-212ENST00000544738 H3BRB1 525 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 TBX10O75333 385 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 RB1P06400 928 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 CTSHP09668 335 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 BMPR1AP36894 532 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 NDUFV1P49821 464 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 CYFIP1Q7L576 1253 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 SERINC5Q86VE9 423 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 TEX2Q8IWB9 1127 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 RASEFQ8IZ41 740 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 ATP6V0A1Q93050 837 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 CDHR1Q96JP9 859 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 C11orf84Q9BUA3 381 aaPredicted RBP18.58■□□□□ 0.56
DDX55-212ENST00000544738 OSBPL7Q9BZF2 842 aa18.58■□□□□ 0.56
DDX55-212ENST00000544738 TUT1Q9H6E5 874 aaKnown RBP18.58■□□□□ 0.56
DDX55-212ENST00000544738 SPDYE3A6NKU9 549 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 ZBTB43O43298 467 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 RCAN1P53805 252 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 ADAM15Q13444 863 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 HEATR3Q7Z4Q2 680 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 GPRASP2Q96D09 838 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 LMAN2LQ9H0V9 348 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 EHMT1Q9H9B1 1298 aa18.57■□□□□ 0.56
DDX55-212ENST00000544738 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 hCG_1984214I3L0E3 225 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 LGALS2P05162 132 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 VCPP55072 806 aaKnown RBP18.56■□□□□ 0.56
DDX55-212ENST00000544738 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 RTN1Q16799 776 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 ZNF713Q8N859 430 aaPredicted RBP18.56■□□□□ 0.56
DDX55-212ENST00000544738 GPR20Q99678 358 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 IRF2BPLQ9H1B7 796 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
DDX55-212ENST00000544738 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
DDX55-212ENST00000544738 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 C5orf67F2Z3F1 127 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 H0Y858 1186 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 MAFGO15525 162 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 FGD1P98174 961 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 ALG13Q9NP73 1137 aaKnown RBP18.55■□□□□ 0.56
DDX55-212ENST00000544738 TLR9Q9NR96 1032 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
DDX55-212ENST00000544738 MYO15AQ9UKN7 3530 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 TREHO43280 583 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 GNAT1P11488 350 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 AVPR2P30518 371 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 KCNB2Q92953 911 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 GLT8D2Q9H1C3 349 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 PCDHA6Q9UN73 950 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 RWDD3Q9Y3V2 267 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 PCDHA8Q9Y5H6 950 aa18.54■□□□□ 0.56
DDX55-212ENST00000544738 CNTNAP5Q8WYK1 1306 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 GOLGA8BA8MQT2 603 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 LOC730098B7Z3J9 87 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 REC8O95072 547 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 EYA4O95677 639 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 FOSP01100 380 aaPredicted RBP18.53■□□□□ 0.56
DDX55-212ENST00000544738 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms