RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 E7EWF7 191 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 USP14P54578 494 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 FAF2Q96CS3 445 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 ASPSCR1Q9BZE9 553 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 DBNDD1Q9H9R9 158 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
ABCA13-207ENST00000544596 MAP3K15Q6ZN16 1313 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 KITP10721 976 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 GCKRQ14397 625 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 ZNF394Q53GI3 561 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 SNX21Q969T3 373 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 KLC2Q9H0B6 622 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 SPDYE5A6NIY4 337 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 ESRRAP11474 423 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 CCT5P48643 541 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 LRRC74AQ0VAA2 488 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 SPDYE7PQ495Y7 208 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 TWF2Q6IBS0 349 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 KBTBD3Q8NAB2 608 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 RUNDC3BQ96NL0 473 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 LRRC37BQ96QE4 947 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 ENC1O14682 589 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 GRIN1Q05586 938 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 DCTPP1Q9H773 170 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 EXOC1LA0A1B0GW35 172 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 GOLGA8IPA6NC78 632 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 GOLGA8JA6NMD2 632 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 ZMYND10O75800 440 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 GFPT2O94808 682 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 CACNB2Q08289 660 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 LRRC31Q6UY01 552 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.012e-7■■■■■ 36.2
ABCA13-207ENST00000544596 TRAF3IP3Q9Y228 551 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 MYO1DO94832 1006 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 TRIM37O94972 964 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 MOCS2O96007 188 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 KRT8P05787 483 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 TCP1P17987 556 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 G2E3Q7L622 706 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 URGCPQ8TCY9 931 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 CENPKQ9BS16 269 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 AMNQ9BXJ7 453 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 CAPN10Q9HC96 672 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 VCAM1P19320 739 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 TBL3Q12788 808 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 LVRNQ6Q4G3 990 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 DDX42Q86XP3 938 aaKnown RBP eCLIP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 RFWD2Q8NHY2 731 aa8.72□□□□□ -1.01
ABCA13-207ENST00000544596 MRPL47Q9HD33 250 aaKnown RBP8.72□□□□□ -1.01
ABCA13-207ENST00000544596 PRR23D1E9PI22 279 aaPredicted RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 GUCA1CO95843 209 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 PRR23D2P0DMB1 279 aaPredicted RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 PFKFB1P16118 471 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 TSPY1Q01534 308 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 ARHGAP18Q8N392 663 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 RAB42Q8N4Z0 105 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 PYROXD1Q8WU10 500 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 SUCLG2Q96I99 432 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 CNOT6LQ96LI5 555 aaKnown RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 TMEM161AQ9NX61 479 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 MID2Q9UJV3 735 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 HSPA1AP0DMV8 641 aaKnown RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 HSPA1BP0DMV9 641 aaKnown RBP8.71□□□□□ -1.01
ABCA13-207ENST00000544596 PYGBP11216 843 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 CUL1Q13616 776 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 PCDHGB4Q9UN71 923 aa8.71□□□□□ -1.01
ABCA13-207ENST00000544596 ARHGAP10A1A4S6 786 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 KRT7P08729 469 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 SLFN14P0C7P3 912 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 SCG2P13521 617 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 SLC9A1P19634 815 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 HOXC9P31274 260 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 FLAD1Q8NFF5 587 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 CCDC51Q96ER9 411 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 CXCR5P32302 372 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 AARSP49588 968 aaKnown RBP eCLIP8.71□□□□□ -1.02
ABCA13-207ENST00000544596 C16orf72Q14CZ0 275 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 MEI1Q5TIA1 1274 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 PKN3Q6P5Z2 889 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 CCNYL1Q8N7R7 359 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 APPL2Q8NEU8 664 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 TTC17Q96AE7 1141 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.02
ABCA13-207ENST00000544596 DMC1Q14565 340 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 RPAINQ86UA6 219 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 CLIC6Q96NY7 704 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 TRPC7Q9HCX4 862 aa8.71□□□□□ -1.02
ABCA13-207ENST00000544596 FLT4P35916 1363 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms