RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 RALGAPA2Q2PPJ7 1873 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 GRXCR2A6NFK2 248 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 GPR37L1O60883 481 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 RPLP2P05387 115 aaKnown RBP15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 MARK3P27448 753 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 WWC2Q6AWC2 1192 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 APOA5Q6Q788 366 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 DNAJB3Q8WWF6 145 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 MXRA8Q9BRK3 442 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 RIC8AQ9NPQ8 531 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 ANO2Q9NQ90 1003 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 PKD2L1Q9P0L9 805 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 SLC9A2Q9UBY0 812 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 NFASCO94856 1347 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 CNTNAP5Q8WYK1 1306 aa15.89■□□□□ 0.13
SEMA4D-224ENST00000544513 NLRC5Q86WI3 1866 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 RRN3P2A6NIE6 340 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 RB1P06400 928 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 INSRRP14616 1297 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 BMPR1AP36894 532 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PLA2G5P39877 138 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 MRPS6P82932 125 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 TSGA10IPQ3SY00 556 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 TCEAL5Q5H9L2 206 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PTCRAQ6ISU1 281 aaPredicted RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PLPPR4Q7Z2D5 763 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 FIBCD1Q8N539 461 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 ZNF689Q96CS4 500 aaPredicted RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 PABPC5Q96DU9 382 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 ARIH1Q9Y4X5 557 aaPredicted RBP15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 CDY2AQ9Y6F7 541 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 SQORQ9Y6N5 450 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 MUC6Q6W4X9 2439 aa15.88■□□□□ 0.13
SEMA4D-224ENST00000544513 FOSP01100 380 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 ITGB3BPQ13352 177 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 BMP2KLQ5H9B9 411 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 TMEM31Q5JXX7 168 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 GJD3Q8N144 294 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 LINC01599Q8WXQ3 324 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 ZBTB10Q96DT7 871 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 NSUN3Q9H649 340 aaKnown RBP15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 RWDD3Q9Y3V2 267 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 ADGRA3Q8IWK6 1321 aa15.87■□□□□ 0.13
SEMA4D-224ENST00000544513 STXBP3O00186 592 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 MEIS1O00470 390 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 DGKIO75912 1065 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 ATG7O95352 703 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 ARP10275 920 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 IL9P15248 144 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 CTNNB1P35222 781 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 ACTR2P61160 394 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 PLCB4Q15147 1175 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 CTC1Q2NKJ3 1217 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 RTN4RL1Q86UN2 441 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 C11orf84Q9BUA3 381 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 LMAN2LQ9H0V9 348 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 AZI2Q9H6S1 392 aa15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 AGO4Q9HCK5 861 aaKnown RBP15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 FAM217BQ9NTX9 383 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-224ENST00000544513 IGKV6D-21A0A0A0MT36 114 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 H3BQ06 376 aaPredicted RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 GRM6O15303 877 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 NCK2O43639 380 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 CD52P31358 61 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 LTBRP36941 435 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 SREBF1P36956 1147 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 NAPAP54920 295 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 IGBP1P78318 339 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 IER5Q5VY09 327 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 RASEFQ8IZ41 740 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 TNPO1Q92973 898 aaKnown RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 SDF4Q9BRK5 362 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 PLVAPQ9BX97 442 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 FTHL17Q9BXU8 183 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 FAM49AQ9H0Q0 323 aaPredicted RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 BARHL2Q9NY43 387 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 V9GY48 417 aaPredicted RBP15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 ATG2AQ2TAZ0 1938 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
SEMA4D-224ENST00000544513 POTEB3A0JP26 581 aa15.84■□□□□ 0.13
SEMA4D-224ENST00000544513 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms