RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ZSWIM3	Q96MP5	696 aa		7.48	□□□□□ -1.21
LEMD3-205	ENST00000544506	PWWP2A	Q96N64	755 aa		7.48	□□□□□ -1.21
LEMD3-205	ENST00000544506	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.48	□□□□□ -1.21
LEMD3-205	ENST00000544506	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
LEMD3-205	ENST00000544506	SHROOM4	Q9ULL8	1493 aa		7.48	□□□□□ -1.21
LEMD3-205	ENST00000544506	KIF11	P52732	1056 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	ADAM9	Q13443	819 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	SMAD4	Q13485	552 aa	Known RBP	7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	TMEM132B	Q14DG7	1078 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	ZNF385B	Q569K4	471 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	RNF187	Q5TA31	235 aa	Predicted RBP	7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	KRT26	Q7Z3Y9	468 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	LINC00482	Q8N8I6	264 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	OR2W6P	Q8NHA6	318 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	ZBTB8A	Q96BR9	441 aa		7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.47	□□□□□ -1.21
LEMD3-205	ENST00000544506	RASSF10	A6NK89	507 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	ZNF839	A8K0R7	811 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	DNAJC6	O75061	913 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	MME	P08473	750 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	SDHA	P31040	664 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	THBS2	P35442	1172 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	SCNN1B	P51168	640 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	HERVK_113	P62684	666 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	CILP2	Q8IUL8	1156 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	KIAA1958	Q8N8K9	716 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	DTX3	Q8N9I9	347 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	KY	Q8NBH2	561 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	SMC1B	Q8NDV3	1235 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	CHTF18	Q8WVB6	975 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	DACT3	Q96B18	629 aa	Predicted RBP	7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	TMEM209	Q96SK2	561 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	TMX1	Q9H3N1	280 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	PCIF1	Q9H4Z3	704 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	SPC25	Q9HBM1	224 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	SLC39A2	Q9NP94	309 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	IFT57	Q9NWB7	429 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	OXSM	Q9NWU1	459 aa		7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	THG1L	Q9NWX6	298 aa	Known RBP	7.46	□□□□□ -1.22
LEMD3-205	ENST00000544506	FOXP2	O15409	715 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	NUAK1	O60285	661 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	ENO2	P09104	434 aa	Predicted RBP	7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	CANX	P27824	592 aa	Known RBP	7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	AOAH	P28039	575 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	CNGA1	P29973	690 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	MC4R	P32245	332 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	PFKP	Q01813	784 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	DHCR24	Q15392	516 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	ZNF174	Q15697	407 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	VWA3B	Q502W6	1294 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	CT47A1	Q5JQC4	288 aa	Predicted RBP	7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	CATSPERE	Q5SY80	951 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	DDX46	Q7L014	1031 aa	Known RBP	7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	STRA8	Q7Z7C7	330 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	ASB15	Q8WXK1	588 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	GPR101	Q96P66	508 aa	Predicted RBP	7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	DLL4	Q9NR61	685 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	BTBD7	Q9P203	1132 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	ARHGAP28	Q9P2N2	729 aa		7.45	□□□□□ -1.22
LEMD3-205	ENST00000544506	SLC9A1	P19634	815 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	ADCYAP1R1	P41586	468 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	AFF3	P51826	1226 aa	Known RBP	7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	IL2	P60568	153 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	DLX2	Q07687	328 aa	Predicted RBP	7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	STRN3	Q13033	797 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	RTP5	Q14D33	572 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	SART3	Q15020	963 aa	Known RBP	7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	SKIDA1	Q1XH10	827 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	PHF19	Q5T6S3	580 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	AFAP1L2	Q8N4X5	818 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	TTLL6	Q8N841	843 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	CLIC6	Q96NY7	704 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	IRF2BPL	Q9H1B7	796 aa		7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.44	□□□□□ -1.22
LEMD3-205	ENST00000544506	PTGS1	P23219	599 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	CAP1	Q01518	475 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	CIAPIN1	Q6FI81	312 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	SAPCD2	Q86UD0	394 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	EFHB	Q8N7U6	833 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	USP7	Q93009	1102 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	GBP4	Q96PP9	640 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	ELF4	Q99607	663 aa	Predicted RBP	7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	KRTAP4-8	Q9BYQ9	185 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	ACSS2	Q9NR19	701 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	SPO11	Q9Y5K1	396 aa		7.43	□□□□□ -1.22
LEMD3-205	ENST00000544506	FKBP9	O95302	570 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	BPI	P17213	487 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	PTX3	P26022	381 aa	Predicted RBP	7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	LSS	P48449	732 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	FNTB	P49356	437 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	KPNA1	P52294	538 aa	Predicted RBP	7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	FKBP9P1	Q75LS8	142 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	HIPK4	Q8NE63	616 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	IGDCC4	Q8TDY8	1250 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	ZNF526	Q8TF50	670 aa	Predicted RBP	7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	TOX2	Q96NM4	488 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	WRNIP1	Q96S55	665 aa		7.42	□□□□□ -1.22
LEMD3-205	ENST00000544506	SPTLC3	Q9NUV7	552 aa		7.42	□□□□□ -1.22

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