RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 VASNQ6EMK4 673 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CIAPIN1Q6FI81 312 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 PKN3Q6P5Z2 889 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 DDX46Q7L014 1031 aaKnown RBP3.35□□□□□ -1.87
YBX3-214ENST00000544501 SAPCD2Q86UD0 394 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 PROSER1Q86XN7 944 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CILP2Q8IUL8 1156 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 DTX3Q8N9I9 347 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 OR2W6PQ8NHA6 318 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 IGDCC4Q8TDY8 1250 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 FNIP1Q8TF40 1166 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CHAC2Q8WUX2 184 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 PWWP2AQ96N64 755 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CLIC6Q96NY7 704 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 GORASP1Q9BQQ3 440 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 SPC25Q9HBM1 224 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 ACSS2Q9NR19 701 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 ZNF839A8K0R7 811 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 KCNK3O14649 394 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 NUAK1O60285 661 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.87
YBX3-214ENST00000544501 AOAHP28039 575 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 AFF3P51826 1226 aaKnown RBP3.34□□□□□ -1.87
YBX3-214ENST00000544501 PFKPQ01813 784 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 ADAM9Q13443 819 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 SEPT7Q16181 437 aaKnown RBP3.34□□□□□ -1.87
YBX3-214ENST00000544501 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 VWA3BQ502W6 1294 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 TCERG1LQ5VWI1 586 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 CPZQ66K79 652 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 NME9Q86XW9 330 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 EFHBQ8N7U6 833 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 LINC01356Q8N9X3 169 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 SMC1BQ8NDV3 1235 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 ZSCAN18Q8TBC5 510 aaPredicted RBP3.34□□□□□ -1.87
YBX3-214ENST00000544501 LEO1Q8WVC0 666 aaPredicted RBP3.34□□□□□ -1.87
YBX3-214ENST00000544501 ZBTB8AQ96BR9 441 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 NOX5Q96PH1 765 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 PCIF1Q9H4Z3 704 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.34□□□□□ -1.87
YBX3-214ENST00000544501 GOLGA2P5Q9HBQ8 144 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 OXSMQ9NWU1 459 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 ARHGAP28Q9P2N2 729 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.34□□□□□ -1.87
YBX3-214ENST00000544501 WASF3Q9UPY6 502 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 ASB1Q9Y576 335 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 SPO11Q9Y5K1 396 aa3.34□□□□□ -1.87
YBX3-214ENST00000544501 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 LOC105371045A0A1W2PR82 267 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 PRAMEF25A6NGN4 478 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 GOLGA6L22H0YM25 854 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 DVL2O14641 736 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 FOXP2O15409 715 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 ZEB2O60315 1214 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 DNAJC6O75061 913 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 ATP2A2P16615 1042 aaKnown RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 CPEP16870 476 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 BPIP17213 487 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 PTGS1P23219 599 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 RPL13P26373 211 aaKnown RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 CFPP27918 469 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 THBS2P35442 1172 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 LSSP48449 732 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 KIF11P52732 1056 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 DLX2Q07687 328 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 TMEM132BQ14DG7 1078 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 SKIDA1Q1XH10 827 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 CT47A1Q5JQC4 288 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 PRR31Q5SQ13 230 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 CATSPEREQ5SY80 951 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 GPR158Q5T848 1215 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 CREB3L3Q68CJ9 461 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 FSTL4Q6MZW2 842 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 TMC5Q6UXY8 1006 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 DPP8Q6V1X1 898 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 TTLL7Q6ZT98 887 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 CXXC5Q7LFL8 322 aaKnown RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 C11orf74Q86VG3 221 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 SIAH1Q8IUQ4 282 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 PASD1Q8IV76 773 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 LRRC56Q8IYG6 542 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 ZZZ3Q8IYH5 903 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 NXPE1Q8N323 547 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 KIAA1958Q8N8K9 716 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 ASB15Q8WXK1 588 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 E2F7Q96AV8 911 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 SPATA6Q9NWH7 488 aaPredicted RBP3.33□□□□□ -1.88
YBX3-214ENST00000544501 NTMQ9P121 344 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 BTBD7Q9P203 1132 aa3.33□□□□□ -1.88
YBX3-214ENST00000544501 RASSF10A6NK89 507 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 ZNF891A8MT65 544 aaPredicted RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 FFAR3O14843 346 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 BRINP1O60477 761 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 KRT37O76014 449 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 FKBP9O95302 570 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 MMEP08473 750 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 KPNA1P52294 538 aaPredicted RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 PHC1P78364 1004 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms