RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 HAS3O00219 553 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
SP140-213ENST00000543928 STAT5BP51692 787 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 ITGA7Q13683 1181 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 PTPAQ15257 358 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 KIAA0753Q2KHM9 967 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 NBPF20Q3BBV1 942 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 FAM160B1Q5W0V3 765 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 SLC39A5Q6ZMH5 540 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 DTHD1Q6ZMT9 781 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 PPP1R13LQ8WUF5 828 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 ERAP1Q9NZ08 941 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 GABBR1Q9UBS5 961 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
SP140-213ENST00000543928 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
SP140-213ENST00000543928 MARK3P27448 753 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 NASPP49321 788 aaPredicted RBP15.32■□□□□ 0.04
SP140-213ENST00000543928 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
SP140-213ENST00000543928 EPHA7Q15375 998 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 IL17AQ16552 155 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 ARL6IP4Q66PJ3 421 aaKnown RBP15.32■□□□□ 0.04
SP140-213ENST00000543928 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 PLPPR4Q7Z2D5 763 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 AFAP1L1Q8TED9 768 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 ATP6V1DQ9Y5K8 247 aa15.32■□□□□ 0.04
SP140-213ENST00000543928 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 ARVCFO00192 962 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
SP140-213ENST00000543928 SNX17Q15036 470 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 SLC39A14Q15043 492 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 STK38Q15208 465 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 UGCGQ16739 394 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 ATL3Q6DD88 541 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 SLC43A3Q8NBI5 491 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 RAB34Q9BZG1 259 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 MAFBQ9Y5Q3 323 aaPredicted RBP15.31■□□□□ 0.04
SP140-213ENST00000543928 IGSF9BQ9UPX0 1349 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 WDR81Q562E7 1941 aa15.31■□□□□ 0.04
SP140-213ENST00000543928 MYH9P35579 1960 aaKnown RBP15.31■□□□□ 0.04
SP140-213ENST00000543928 ATP4AP20648 1035 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 SLC26A2P50443 739 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 CYP4A11Q02928 519 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 PDIA5Q14554 519 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 PLCB4Q15147 1175 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 NFRKBQ6P4R8 1299 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 CKAP2LQ8IYA6 745 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 C7orf31Q8N865 590 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 LINC00301Q8NCQ3 95 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 ATP6V0A1Q93050 837 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 CHAMP1Q96JM3 812 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 EIF2AK1Q9BQI3 630 aaKnown RBP15.3■□□□□ 0.04
SP140-213ENST00000543928 SEZ6LQ9BYH1 1024 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 RGL1Q9NZL6 768 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
SP140-213ENST00000543928 POTEB3A0JP26 581 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 ZNF862O60290 1169 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 YEATS4O95619 227 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 P4HBP07237 508 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 SMIM10L2AP0DMW4 78 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 SMIM10L2BP0DMW5 78 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 QARSP47897 775 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 CDK7P50613 346 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 RTP1P59025 263 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 PSMC5P62195 406 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 PRKCEQ02156 737 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 CTTNQ14247 550 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 TRIM60Q495X7 471 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 POTEBQ6S5H4 581 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 TRMT1LQ7Z2T5 733 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 NEK9Q8TD19 979 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 ATP8B4Q8TF62 1192 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 HSD17B14Q9BPX1 270 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 LXNQ9BS40 222 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 CHMP5Q9NZZ3 219 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 ATP11BQ9Y2G3 1177 aa15.29■□□□□ 0.04
SP140-213ENST00000543928 MKI67P46013 3256 aaKnown RBP15.29■□□□□ 0.04
SP140-213ENST00000543928 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 SPTLC2O15270 562 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
SP140-213ENST00000543928 SLITRK3O94933 977 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 KRT85P78386 507 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 TLE2Q04725 743 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 GRIN1Q05586 938 aa15.28■□□□□ 0.04
SP140-213ENST00000543928 PTPN11Q06124 597 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms