RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.87
VPS13D-212ENST00000543766 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.87
VPS13D-212ENST00000543766 TRIM8Q9BZR9 551 aa9.65□□□□□ -0.87
VPS13D-212ENST00000543766 WDR6Q9NNW5 1121 aaKnown RBP9.65□□□□□ -0.87
VPS13D-212ENST00000543766 PCDHGB3Q9Y5G1 929 aa9.65□□□□□ -0.87
VPS13D-212ENST00000543766 HDAC3O15379 428 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 DNAJC8O75937 253 aaPredicted RBP9.64□□□□□ -0.87
VPS13D-212ENST00000543766 FLOT1O75955 427 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 SASH3O75995 380 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PDHA1P08559 390 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 HSMCR30P0CW71 290 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 POU2F1P14859 743 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 ECE1P42892 770 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 KRT32Q14532 448 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 JAMLQ86YT9 394 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 RFWD2Q8NHY2 731 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 VPS37BQ9H9H4 285 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PPP2R3BQ9Y5P8 575 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 WDR33Q9C0J8 1336 aaKnown RBP9.64□□□□□ -0.87
VPS13D-212ENST00000543766 KIF24Q5T7B8 1368 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 ERICH2A1L162 156 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 NOTOA8MTQ0 251 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 KPNA6O60684 536 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 BCRP11274 1271 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 KCNA6P17658 529 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 MAPK9P45984 424 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PTK2Q05397 1052 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 MIS18BP1Q6P0N0 1132 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 DGKHQ86XP1 1220 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 TAB3Q8N5C8 712 aaPredicted RBP9.64□□□□□ -0.87
VPS13D-212ENST00000543766 UBR7Q8N806 425 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 HERVK_113Q902F9 699 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 ZWILCHQ9H900 591 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PAG1Q9NWQ8 432 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 EURLQ9NYK6 297 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 TBC1D8O95759 1140 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 ACTN1P12814 892 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 CYP4A11Q02928 519 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 CEP68Q76N32 757 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
VPS13D-212ENST00000543766 BRF1Q92994 677 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 PMEPA1Q969W9 287 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 LRGUKQ96M69 825 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 ARNT2Q9HBZ2 717 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 CDC42BPGQ6DT37 1551 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 TTC21BQ7Z4L5 1316 aa9.64□□□□□ -0.87
VPS13D-212ENST00000543766 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CCZ1BP86790 482 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CCZ1P86791 482 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 DAB2P98082 770 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 PPP2R3AQ06190 1150 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 ERAP2Q6P179 960 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 SRGAP1Q7Z6B7 1085 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 LRRC8AQ8IWT6 810 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 C2orf69Q8N8R5 385 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 PLEKHF1Q96S99 279 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 PARVBQ9HBI1 364 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 UCKL1Q9NWZ5 548 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 ABCC4O15439 1325 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 NSD2O96028 1365 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 ATP10DQ9P241 1426 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 TTI1O43156 1089 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 RASGRP1O95267 797 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 UBL4AP11441 157 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 S100A1P23297 94 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 MSLNQ13421 630 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 VEPH1Q14D04 833 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 PHLDB2Q86SQ0 1253 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 TOR1AIP2Q8NFQ8 470 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 RUBCNQ92622 972 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CNDP1Q96KN2 507 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 BAIAP2L1Q9UHR4 511 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 SQORQ9Y6N5 450 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 LRRIQ3A6PVS8 624 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CYTH3O43739 400 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 GNRH1P01148 92 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 MUTP22033 750 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 SEC13P55735 322 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 SARM1Q6SZW1 724 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 RFX8Q6ZV50 586 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 USP37Q86T82 979 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 NSMCE1Q8WV22 266 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 CATSPER2Q96P56 530 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 MIS12Q9H081 205 aa9.63□□□□□ -0.87
VPS13D-212ENST00000543766 ORC3Q9UBD5 711 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 FAF1Q9UNN5 650 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 PCDHB13Q9Y5F0 798 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms