RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 FTCDO95954 541 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 LMNAP02545 664 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ECHS1P30084 290 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PDE6BP35913 854 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 GFPT1Q06210 699 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 BNIP1Q12981 228 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ASIC2Q16515 512 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 NAALADL2Q58DX5 795 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 NUP188Q5SRE5 1749 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 CABP7Q86V35 215 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 RASGEF1CQ8N431 466 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ANKRD13CQ8N6S4 541 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SPATA5Q8NB90 893 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 DAGLBQ8NCG7 672 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 BICD1Q96G01 975 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 CEP63Q96MT8 703 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ELAC2Q9BQ52 826 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ROPN1BQ9BZX4 212 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ZMYND12Q9H0C1 365 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 TAOK3Q9H2K8 898 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PABPC3Q9H361 631 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ECT2Q9H8V3 914 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ARMT1Q9H993 441 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ROPN1Q9HAT0 212 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ARHGEF3Q9NR81 526 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PAPOLBQ9NRJ5 636 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 TXLNGQ9NUQ3 528 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 AIPL1Q9NZN9 384 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PCDHA4Q9UN74 947 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ARL2BPQ9Y2Y0 163 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 MROH5Q6ZUA9 1318 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 CNTNAP5Q8WYK1 1306 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SNX3O60493 162 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SMIM24O75264 130 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 GFPT2O94808 682 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 RTN3O95197 1032 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 GSTA2P09210 222 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 KLRC1P26715 233 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 MSH2P43246 934 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 RAB27AP51159 221 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 NCALDP61601 193 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 MXRA7P84157 204 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 KLHL30Q0D2K2 578 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 CCDC15Q0P6D6 951 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 DHX34Q14147 1143 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 NPY5RQ15761 445 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 IL17AQ16552 155 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SPRED3Q2MJR0 410 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PARP6Q2NL67 630 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ANKRD20A2Q5SQ80 823 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ANKRD20A1Q5TYW2 823 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ANKRD20A3Q5VUR7 823 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 HGSNATQ68CP4 663 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PI16Q6UXB8 463 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 UNC13DQ70J99 1090 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SV2BQ7L1I2 683 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 RPUSD2Q8IZ73 545 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 CMTR1Q8N1G2 835 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 GALNT15Q8N3T1 639 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PIP4P2Q8N4L2 257 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ZNF570Q96NI8 536 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 OSBPL1AQ9BXW6 950 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 TANGO6Q9C0B7 1094 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 YIPF3Q9GZM5 350 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PANK4Q9NVE7 773 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.44□□□□□ -1.54
LMO3-229ENST00000543721 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SALL4Q9UJQ4 1053 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 LRRC42Q9Y546 428 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 RIC1Q4ADV7 1423 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 NBPF26B4DH59 902 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 BAG3O95817 575 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 RASSF2P50749 326 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ALDH5A1P51649 535 aaPredicted RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 FKBP3Q00688 224 aaKnown RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 TROAPQ12815 778 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 GALNTL6Q49A17 601 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 FAM83BQ5T0W9 1011 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 KIF6Q6ZMV9 814 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 LRRC34Q8IZ02 419 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 AGGF1Q8N302 714 aaeCLIP5.43□□□□□ -1.54
LMO3-229ENST00000543721 NBPF15Q8N660 670 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 OR2W6PQ8NHA6 318 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 DYDC1Q8WWB3 177 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ZBTB10Q96DT7 871 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 MYH7BA7E2Y1 1941 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 POTEFA5A3E0 1075 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ENO4A6NNW6 628 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 IGF2BP3O00425 579 aaKnown RBP eCLIP5.43□□□□□ -1.54
LMO3-229ENST00000543721 PRDM1O75626 825 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 POTEIP0CG38 1075 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 POTEJP0CG39 1038 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 SETSIPP0DME0 302 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ATP4AP20648 1035 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PCK1P35558 622 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PMS2P54278 862 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 FAM133BQ5BKY9 247 aaKnown RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 POTEEQ6S8J3 1075 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PEX26Q7Z412 305 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms