RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 BRF1Q92994 677 aa18.61■□□□□ 0.57
SPPL3-207ENST00000543608 IFIH1Q9BYX4 1025 aaKnown RBP18.61■□□□□ 0.57
SPPL3-207ENST00000543608 SMARCAD1Q9H4L7 1026 aa18.61■□□□□ 0.57
SPPL3-207ENST00000543608 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
SPPL3-207ENST00000543608 BDP1A6H8Y1 2624 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 hCG_1984214I3L0E3 225 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 TNFRSF10AO00220 468 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 MAFGO15525 162 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 CLK2P49760 499 aaKnown RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 ACTR2P61160 394 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 HTRA4P83105 476 aaPredicted RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 MGAT3Q09327 533 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 JAKMIP3Q5VZ66 844 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 ZNF713Q8N859 430 aaPredicted RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 DNAJB3Q8WWF6 145 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 UHRF1Q96T88 793 aaPredicted RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 FAM49AQ9H0Q0 323 aaPredicted RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 AGO4Q9HCK5 861 aaKnown RBP18.6■□□□□ 0.57
SPPL3-207ENST00000543608 LOXHD1Q8IVV2 1947 aa18.6■□□□□ 0.57
SPPL3-207ENST00000543608 NFASCO94856 1347 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 MBLAC1A4D2B0 266 aaPredicted RBP18.59■□□□□ 0.57
SPPL3-207ENST00000543608 DDX39AO00148 427 aaKnown RBP18.59■□□□□ 0.57
SPPL3-207ENST00000543608 FOSP01100 380 aaPredicted RBP18.59■□□□□ 0.57
SPPL3-207ENST00000543608 INSRRP14616 1297 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 SREBF1P36956 1147 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 RCAN1P53805 252 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 AP3B2Q13367 1082 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 LPIN1Q14693 890 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 PFKFB3Q16875 520 aaPredicted RBP18.59■□□□□ 0.57
SPPL3-207ENST00000543608 TAF2Q6P1X5 1199 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 SP7Q8TDD2 431 aaPredicted RBP18.59■□□□□ 0.57
SPPL3-207ENST00000543608 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 TOP1MTQ969P6 601 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 YME1L1Q96TA2 773 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 SDF4Q9BRK5 362 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 TRPC6Q9Y210 931 aa18.59■□□□□ 0.57
SPPL3-207ENST00000543608 SCG2P13521 617 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 BLOC1S2Q6QNY1 142 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 RPAINQ86UA6 219 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 FBXO22Q8NEZ5 403 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 APBB2Q92870 758 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 PHKBQ93100 1093 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 AZI2Q9H6S1 392 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 CDY2AQ9Y6F7 541 aa18.58■□□□□ 0.56
SPPL3-207ENST00000543608 NID2Q14112 1375 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 COL4A6Q14031 1691 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 FAM86B1E9PN63 330 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 MEIS1O00470 390 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 CCNE2O96020 404 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 FAM86B2P0C5J1 330 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 BMP1P13497 986 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 ZNF76P36508 570 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 TMEM62Q0P6H9 643 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 PLCB4Q15147 1175 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 PKN1Q16512 942 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 ATG2AQ2TAZ0 1938 aa18.57■□□□□ 0.56
SPPL3-207ENST00000543608 RALGAPA2Q2PPJ7 1873 aa18.56■□□□□ 0.56
SPPL3-207ENST00000543608 MRPS6P82932 125 aaKnown RBP18.56■□□□□ 0.56
SPPL3-207ENST00000543608 FBXO47Q5MNV8 452 aa18.56■□□□□ 0.56
SPPL3-207ENST00000543608 RSPH3Q86UC2 560 aa18.56■□□□□ 0.56
SPPL3-207ENST00000543608 PLA2G4DQ86XP0 818 aa18.56■□□□□ 0.56
SPPL3-207ENST00000543608 RASGRP4Q8TDF6 673 aa18.56■□□□□ 0.56
SPPL3-207ENST00000543608 IGLV3-22A0A075B6J6 115 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 CCDC196A0A1B0GTZ2 297 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 STAT5BP51692 787 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 AAK1Q2M2I8 961 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 EPC2Q52LR7 807 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 CCDC60Q8IWA6 550 aaPredicted RBP18.55■□□□□ 0.56
SPPL3-207ENST00000543608 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 CRYGNQ8WXF5 182 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 HLA-CQ95604 372 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 ZMYND12Q9H0C1 365 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 GLT8D2Q9H1C3 349 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 AGO3Q9H9G7 860 aaKnown RBP18.55■□□□□ 0.56
SPPL3-207ENST00000543608 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
SPPL3-207ENST00000543608 COG5Q9UP83 839 aa18.55■□□□□ 0.56
SPPL3-207ENST00000543608 ESYT2A0FGR8 921 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 RRN3P2A6NIE6 340 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 CD52P31358 61 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 CCT2P78371 535 aaKnown RBP18.54■□□□□ 0.56
SPPL3-207ENST00000543608 PLPPR4Q7Z2D5 763 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 REXO1Q8N1G1 1221 aaKnown RBP18.54■□□□□ 0.56
SPPL3-207ENST00000543608 LINC01599Q8WXQ3 324 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 AGXT2Q9BYV1 514 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 LMCD1Q9NZU5 365 aa18.54■□□□□ 0.56
SPPL3-207ENST00000543608 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 BACH1O14867 736 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 DHX15O43143 795 aaKnown RBP18.53■□□□□ 0.56
SPPL3-207ENST00000543608 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
SPPL3-207ENST00000543608 REC8O95072 547 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 ATG7O95352 703 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 TTC3P53804 2025 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 NTRK3Q16288 839 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
SPPL3-207ENST00000543608 ABHD15Q6UXT9 468 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms