RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PPP1R13LQ8WUF5 828 aa19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 RNPEPQ9H4A4 650 aa19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 HDAC6Q9UBN7 1215 aa19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 GABBR1Q9UBS5 961 aa19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 MAFBQ9Y5Q3 323 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 ALPK3Q96L96 1907 aa19.26■□□□□ 0.67
RABGGTA-203ENST00000543002 DCDC2CA8MYV0 355 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 EVI5O60447 810 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 F13A1P00488 732 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 MARK3P27448 753 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 PRPHP41219 470 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 ATP2C1P98194 919 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 EPHA7Q15375 998 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 FOXD4L5Q5VV16 416 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 NCAPH2Q6IBW4 605 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 PDXDC2PQ6P474 469 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 FOXD4L4Q8WXT5 416 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 GTF2IRD1Q9UHL9 959 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 IGSF9BQ9UPX0 1349 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 TLR3O15455 904 aaKnown RBP19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 BMP15O95972 392 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 CD4P01730 458 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 SMIM10L2AP0DMW4 78 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 SMIM10L2BP0DMW5 78 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 PLCB4Q15147 1175 aa19.25■□□□□ 0.67
RABGGTA-203ENST00000543002 B4GALT4O60513 344 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 BRD1O95696 1058 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 ATP4AP20648 1035 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 HOXC8P31273 242 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 TECP42680 631 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 FXR2P51116 673 aaKnown RBP eCLIP19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 SF3A1Q15459 793 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 TMEM266Q2M3C6 531 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 GDF6Q6KF10 455 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 C7orf61Q8IZ16 206 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 ATP8B4Q8TF62 1192 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 ATP6V0A1Q93050 837 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 TRPV6Q9H1D0 765 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 CEP131Q9UPN4 1083 aa19.24■□□□□ 0.67
RABGGTA-203ENST00000543002 POTEB3A0JP26 581 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 POTEMA6NI47 508 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 ZNF862O60290 1169 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 CLTBP09497 229 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 UGCGQ16739 394 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 POTEBQ6S5H4 581 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 TSHZ2Q9NRE2 1034 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 TRMT13Q9NUP7 481 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 TRPC6Q9Y210 931 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 NR2E3Q9Y5X4 410 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
RABGGTA-203ENST00000543002 NRCAMQ92823 1304 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 C17orf102A2RUQ5 167 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 HBP1O60381 514 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 P4HBP07237 508 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 DDIT3P35638 169 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 QARSP47897 775 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 PSMC5P62195 406 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 PPFIA1Q13136 1202 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 HIC1Q14526 733 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 PDIA5Q14554 519 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 PTGISQ16647 500 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 CKAP2LQ8IYA6 745 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 NEK9Q8TD19 979 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 FAM167AQ96KS9 214 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 EIF2AK1Q9BQI3 630 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 PDLIM7Q9NR12 457 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 SETD4Q9NVD3 440 aa19.22■□□□□ 0.67
RABGGTA-203ENST00000543002 MYH9P35579 1960 aaKnown RBP19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 GNAT1P11488 350 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 INSRRP14616 1297 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 ADAM17P78536 824 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 PRKCEQ02156 737 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 PTPAQ15257 358 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 GRIK4Q16099 956 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 IL17AQ16552 155 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 IGSF22Q8N9C0 903 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 DYDC2Q96IM9 177 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 HSD17B14Q9BPX1 270 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 RAB34Q9BZG1 259 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 TMEM39AQ9NV64 488 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 RGL1Q9NZL6 768 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 NOD1Q9Y239 953 aa19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
RABGGTA-203ENST00000543002 WDR81Q562E7 1941 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 RRN3P2A6NIE6 340 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 SLITRK3O94933 977 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 OATP04181 439 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms