RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 PAGR1Q9BTK6 254 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 LSM14BQ9BX40 385 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PACSIN1Q9BY11 444 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DPH5Q9H2P9 285 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DBNDD1Q9H9R9 158 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 CNOT8Q9UFF9 292 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 FBXL5Q9UKA1 691 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PCDHA6Q9UN73 950 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DDX60Q8IY21 1712 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 AKAP11Q9UKA4 1901 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TLDC2A0PJX2 215 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TRAF5O00463 557 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PJA2O43164 708 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TRAPPC3O43617 180 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 SKAP2O75563 359 aaPredicted RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 CLTAP09496 248 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 HSPA9P38646 679 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PPP2R2AP63151 447 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 GPSM2P81274 684 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 FAM228AQ86W67 206 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 MREGQ8N565 214 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 USP38Q8NB14 1042 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 IQCDQ96DY2 449 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 GPR101Q96P66 508 aaPredicted RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 SELENOSQ9BQE4 189 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TACO1Q9BSH4 297 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DDX47Q9H0S4 455 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 GOPCQ9HD26 462 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 PLCB1Q9NQ66 1216 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 ANAPC4Q9UJX5 808 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 MYH13Q9UKX3 1938 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TJP1Q07157 1748 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DCDC2CA8MYV0 355 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 BUB1BO60566 1050 aaPredicted RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 LCA5LO95447 670 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 OR52Z1P0C646 297 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 FLT3P36888 993 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 EPS15P42566 896 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 ZNF844Q08AG5 666 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 KLHL30Q0D2K2 578 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 RBM26Q5T8P6 1007 aaKnown RBP5.81□□□□□ -1.48
KDM3B-209ENST00000542866 WLSQ5T9L3 541 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 DPY19L2Q6NUT2 758 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 EXOC8Q8IYI6 725 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 FAM133AQ8N9E0 248 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 BAP1Q92560 729 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TSG101Q99816 390 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 COA1Q9GZY4 146 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 ISCUQ9H1K1 167 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 CPVLQ9H3G5 476 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 VAT1LQ9HCJ6 419 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 TBC1D7Q9P0N9 293 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 LAMB4A4D0S4 1761 aa5.81□□□□□ -1.48
KDM3B-209ENST00000542866 ADAMTS7Q9UKP4 1686 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 GRID2IPA4D2P6 1211 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 WTIPA6NIX2 430 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 DAPK3O43293 454 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 GOLGA8HP0CJ92 632 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 SLC8A1P32418 973 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 PPP1R2P41236 205 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 DHX9Q08211 1270 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 NAB2Q15742 525 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 FAM83BQ5T0W9 1011 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 MEI1Q5TIA1 1274 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 LRCH2Q5VUJ6 765 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 THOC1Q96FV9 657 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 C7orf25Q9BPX7 421 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CRNKL1Q9BZJ0 848 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 FHDC1Q9C0D6 1143 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 NEUROG2Q9H2A3 272 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 ZNF277Q9NRM2 450 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 A0A087X0T9 212 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 KRIT1O00522 736 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 SART1O43290 800 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CTNND1O60716 968 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 SERPING1P05155 500 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 FAM228BP0C875 321 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 NAPAP54920 295 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TFAP4Q01664 338 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 KCNMA1Q12791 1236 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 UAP1Q16222 522 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 FAM133BQ5BKY9 247 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 HGSNATQ68CP4 663 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CENPPQ6IPU0 288 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 LRIG3Q6UXM1 1119 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TBC1D1Q86TI0 1168 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TEX11Q8IYF3 940 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 PNMA1Q8ND90 353 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TBC1D16Q8TBP0 767 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 RSRC1Q96IZ7 334 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 INPP4AQ96PE3 977 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CUEDC2Q9H467 287 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 AMACRQ9UHK6 382 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 GGA2Q9UJY4 613 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 ATP8A1Q9Y2Q0 1164 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 MYH6P13533 1939 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms