RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 LOXHD1Q8IVV2 1947 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 LINC01553A4QN01 128 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 RRN3P2A6NIE6 340 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 MEIS1O00470 390 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 MARK3P27448 753 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 ADD1P35611 737 aaKnown RBP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 MGAT3Q09327 533 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 GRB10Q13322 594 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 MYOCDQ8IZQ8 938 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 MICALL1Q8N3F8 863 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 IFIH1Q9BYX4 1025 aaKnown RBP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 ZMYND12Q9H0C1 365 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 AZI2Q9H6S1 392 aa17.83■□□□□ 0.44
VPS33A-206ENST00000542310 AGO4Q9HCK5 861 aaKnown RBP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 XIRP2A4UGR9 3374 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 RFXAPO00287 272 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
VPS33A-206ENST00000542310 LPXNO60711 386 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 CPA1P15085 419 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 SLC26A2P50443 739 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 ACTR2P61160 394 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 SETQ01105 290 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-206ENST00000542310 AAK1Q2M2I8 961 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 RUFY4Q6ZNE9 571 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 PLPPR4Q7Z2D5 763 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 CYP2W1Q8TAV3 490 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 CRYGNQ8WXF5 182 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 SAMD11Q96NU1 681 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 PCYT2Q99447 389 aa17.82■□□□□ 0.44
VPS33A-206ENST00000542310 RNF26Q9BY78 433 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-206ENST00000542310 ATG7O95352 703 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 CHRNA1P02708 482 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 CYP3A4P08684 503 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 ARP10275 920 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 GNA11P29992 359 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 EVCP57679 992 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 ITGB3BPQ13352 177 aaPredicted RBP17.81■□□□□ 0.44
VPS33A-206ENST00000542310 MARCH8Q5T0T0 291 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 SPRED2Q7Z698 418 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 REXO1Q8N1G1 1221 aaKnown RBP17.81■□□□□ 0.44
VPS33A-206ENST00000542310 CCDC148Q8NFR7 591 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 TOP1MTQ969P6 601 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 C6orf50Q9HD87 102 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 TMEM260Q9NX78 707 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 COG5Q9UP83 839 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 TTC3P53804 2025 aa17.81■□□□□ 0.44
VPS33A-206ENST00000542310 IGKV6D-21A0A0A0MT36 114 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
VPS33A-206ENST00000542310 ZNF76P36508 570 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 PKN1Q16512 942 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 IL27Q8NEV9 243 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 TRPC6Q9Y210 931 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 SQORQ9Y6N5 450 aa17.8■□□□□ 0.44
VPS33A-206ENST00000542310 NCOR1O75376 2440 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 IGLV3-22A0A075B6J6 115 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 GHRP10912 638 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 INSRRP14616 1297 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 IFNAR1P17181 557 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 STAT5BP51692 787 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 MRPS6P82932 125 aaKnown RBP17.79■□□□□ 0.44
VPS33A-206ENST00000542310 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
VPS33A-206ENST00000542310 PLCB4Q15147 1175 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 NTRK3Q16288 839 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 JAKMIP3Q5VZ66 844 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 FAM117BQ6P1L5 589 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 TSHZ1Q6ZSZ6 1077 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 YME1L1Q96TA2 773 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 OSBPL7Q9BZF2 842 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 COL1A2P08123 1366 aa17.79■□□□□ 0.44
VPS33A-206ENST00000542310 FAM86B1E9PN63 330 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 FAM86B2P0C5J1 330 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 LPIN1Q14693 890 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 SKIV2LQ15477 1246 aaKnown RBP17.78■□□□□ 0.44
VPS33A-206ENST00000542310 FBXO47Q5MNV8 452 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 FAM160B1Q5W0V3 765 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 KRT40Q6A162 431 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
VPS33A-206ENST00000542310 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 PLA2G4DQ86XP0 818 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 DNAJB3Q8WWF6 145 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 PCDHA2Q9Y5H9 948 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 CDY2AQ9Y6F7 541 aa17.78■□□□□ 0.44
VPS33A-206ENST00000542310 KDM3AQ9Y4C1 1321 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 ATG2AQ2TAZ0 1938 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 POTEB3A0JP26 581 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 M0QZ92 97 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 IPO5O00410 1097 aaKnown RBP17.77■□□□□ 0.44
VPS33A-206ENST00000542310 CCNE2O96020 404 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 CIITAP33076 1130 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 IGBP1P78318 339 aa17.77■□□□□ 0.44
VPS33A-206ENST00000542310 IER5Q5VY09 327 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms