RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 HSPA1BP0DMV9 641 aaKnown RBP12.14□□□□□ -0.47
CDH3-203ENST00000542274 GUCY2FP51841 1108 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 GTF2IP78347 998 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 SLC39A14Q15043 492 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
CDH3-203ENST00000542274 PDILTQ8N807 584 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
CDH3-203ENST00000542274 CENPTQ96BT3 561 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 TBC1D31Q96DN5 1066 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 MAELQ96JY0 434 aaKnown RBP12.14□□□□□ -0.47
CDH3-203ENST00000542274 R3HDM2Q9Y2K5 976 aaKnown RBP12.14□□□□□ -0.47
CDH3-203ENST00000542274 C15orf41Q9Y2V0 281 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
CDH3-203ENST00000542274 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 MMP1P03956 469 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 BEND6Q5SZJ8 279 aaPredicted RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 B4GALNT4Q76KP1 1039 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 FUKQ8N0W3 1084 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 PCDHB6Q9Y5E3 794 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 IKBKGQ9Y6K9 419 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 FOXN1O15353 648 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 MGRN1O60291 552 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 URI1O94763 535 aaPredicted RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 IL1R1P14778 569 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 CCT8P50990 548 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 IRAK1P51617 712 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 CCZ1BP86790 482 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 CCZ1P86791 482 aaPredicted RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 LMNTD2Q8IXW0 634 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 ZNF570Q96NI8 536 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
CDH3-203ENST00000542274 SAP30BPQ9UHR5 308 aaKnown RBP12.13□□□□□ -0.47
CDH3-203ENST00000542274 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 ERCC5P28715 1186 aaPredicted RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 TROAPQ12815 778 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 SLMAPQ14BN4 828 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 TMCO1Q9UM00 188 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 MAP3K13O43283 966 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 CTAG1AP78358 180 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 STX1AQ16623 288 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 KAZNQ674X7 775 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 EXOC3L1Q86VI1 746 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 SAMD14Q8IZD0 417 aaPredicted RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 ATP6V0A1Q93050 837 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 PPP1R13BQ96KQ4 1090 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 SNX27Q96L92 541 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 CRNKL1Q9BZJ0 848 aaKnown RBP12.12□□□□□ -0.47
CDH3-203ENST00000542274 EHD4Q9H223 541 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 CABP5Q9NP86 173 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 INIPQ9NRY2 104 aa12.12□□□□□ -0.47
CDH3-203ENST00000542274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH3-203ENST00000542274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
CDH3-203ENST00000542274 HTR3EA5X5Y0 456 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 RASSF10A6NK89 507 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 FOXD2O60548 495 aaPredicted RBP12.11□□□□□ -0.47
CDH3-203ENST00000542274 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDH3-203ENST00000542274 MXRA7P84157 204 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 FUT2Q10981 343 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 ZNF362Q5T0B9 420 aaPredicted RBP12.11□□□□□ -0.47
CDH3-203ENST00000542274 TCERG1LQ5VWI1 586 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 HESX1Q9UBX0 185 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
CDH3-203ENST00000542274 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 DEXIO95424 95 aa12.11□□□□□ -0.47
CDH3-203ENST00000542274 IDO1P14902 403 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms