RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 NLRX1Q86UT6 975 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 PSTPIP2Q9H939 334 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 CLDND1Q9NY35 253 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 SEC63Q9UGP8 760 aaKnown RBP17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 HCN4Q9Y3Q4 1203 aa17.77■□□□□ 0.44
CLSTN3-213ENST00000541953 C5orf67F2Z3F1 127 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 SLC27A2O14975 620 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 LINC01565O15544 149 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 CD52P31358 61 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 KIF5BP33176 963 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 ZP2Q05996 745 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 TMEM62Q0P6H9 643 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 XRRA1Q6P2D8 792 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 SEPT1Q8WYJ6 367 aa17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 ZNF689Q96CS4 500 aaPredicted RBP17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 FAM49AQ9H0Q0 323 aaPredicted RBP17.76■□□□□ 0.43
CLSTN3-213ENST00000541953 TBX10O75333 385 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 INSRRP14616 1297 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 DNAJB1P25685 340 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 BMPR1AP36894 532 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 GATMP50440 423 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 MTMR1Q13613 665 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 TMTC3Q6ZXV5 915 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 CRIPAKQ8N1N5 446 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 GLG1Q92896 1179 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 JADE2Q9NQC1 790 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 ERAP1Q9NZ08 941 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
CLSTN3-213ENST00000541953 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 MCM5P33992 734 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 MRPS6P82932 125 aaKnown RBP17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 HEATR3Q7Z4Q2 680 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 CLP1Q92989 425 aaKnown RBP17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 ALG13Q9NP73 1137 aaKnown RBP17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 MRPL42Q9Y6G3 142 aaKnown RBP17.74■□□□□ 0.43
CLSTN3-213ENST00000541953 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 DGKIO75912 1065 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 ARP10275 920 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 ITGB3BPQ13352 177 aaPredicted RBP17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 PLCB4Q15147 1175 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 TSHZ1Q6ZSZ6 1077 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 GIMAP8Q8ND71 665 aaPredicted RBP17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 TMEM87BQ96K49 555 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 KCNH7Q9NS40 1196 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
CLSTN3-213ENST00000541953 PRR33A8MZF0 331 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 IRS1P35568 1242 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 LIFRP42702 1097 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 GNAQP50148 359 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 FUT2Q10981 343 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 BTG3Q14201 252 aaPredicted RBP17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 NECTIN1Q15223 517 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 PAN2Q504Q3 1202 aaKnown RBP17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 ADGRD2Q7Z7M1 963 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 FANCBQ8NB91 859 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 ESYT1Q9BSJ8 1104 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 SMARCAD1Q9H4L7 1026 aa17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 JPH1Q9HDC5 661 aaPredicted RBP17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 ARIH1Q9Y4X5 557 aaPredicted RBP17.72■□□□□ 0.43
CLSTN3-213ENST00000541953 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 RB1P06400 928 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 ACTR2P61160 394 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 CDHR1Q96JP9 859 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 UIMC1Q96RL1 719 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 C11orf84Q9BUA3 381 aaPredicted RBP17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 IGFLR1Q9H665 355 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 TMEM260Q9NX78 707 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 HCSTQ9UBK5 93 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 SLC9A2Q9UBY0 812 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 PADI3Q9ULW8 664 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 SLC12A7Q9Y666 1083 aa17.71■□□□□ 0.43
CLSTN3-213ENST00000541953 FNDC1Q4ZHG4 1894 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 MBTPS2O43462 519 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 DCXO43602 365 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 MGEA5O60502 916 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 CCNE2O96020 404 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 MMP1P03956 469 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 ITGB1P05556 798 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 SMAD2Q15796 467 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms