RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 PPP1R36Q96LQ0 422 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ZNF512Q96ME7 567 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 RMDN3Q96TC7 470 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 VCX3AQ9NNX9 186 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 INTUQ9ULD6 942 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 F8W8V4 182 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ZNF202O95125 648 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 FOSP01100 380 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 ACADMP11310 421 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 PPARGP37231 505 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 CUL1Q13616 776 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 TTLL4Q14679 1199 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 C10orf53Q8N6V4 93 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 DCUN1D1Q96GG9 259 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 CCDC138Q96M89 665 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ARHGEF10O15013 1369 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ARHGAP10A1A4S6 786 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 E7EWF7 191 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 MYO1FO00160 1098 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 PBLDP30039 288 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 KPNA1P52294 538 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 HMGCS2P54868 508 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 P3H4Q92791 437 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 L3MBTL3Q96JM7 780 aaPredicted RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 CLIC6Q96NY7 704 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 MAP3K20Q9NYL2 800 aaKnown RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 SELENONQ9NZV5 590 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 TJP2Q9UDY2 1190 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 USP19O94966 1318 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 RNF123Q5XPI4 1314 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 U2AF2P26368 475 aaKnown RBP eCLIP6.8□□□□□ -1.324e-6■■□□□ 13.2
DMD-228ENST00000541735 PDIA3P30101 505 aaKnown RBP6.8□□□□□ -1.32
DMD-228ENST00000541735 CDC25AP30304 524 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 CRKP46108 304 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ITPRIPL1Q6GPH6 555 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 MICALL2Q8IY33 904 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ZFP42Q96MM3 310 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 ACCSQ96QU6 501 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 PI4KBQ9UBF8 816 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 TRAF3IP3Q9Y228 551 aa6.8□□□□□ -1.32
DMD-228ENST00000541735 GOLGA8MH3BSY2 632 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 IFNA8P32881 189 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 EVCP57679 992 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 PSMC1P62191 440 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 RALGDSQ12967 914 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 PWP1Q13610 501 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 CDC37Q16543 378 aaPredicted RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 COBLL1Q53SF7 1204 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 SPATA2LQ8IUW3 424 aaPredicted RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 RSRC1Q96IZ7 334 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 NFKBIZQ9BYH8 718 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 PAXBP1Q9Y5B6 917 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ADCY9O60503 1353 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 LRG1P02750 347 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 AP1B1Q10567 949 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 BMP2KLQ5H9B9 411 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 PRR12Q9ULL5 1215 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ASXL2Q76L83 1435 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ANKRD36BQ8N2N9 1353 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 MED7O43513 233 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 PRKAB2O43741 272 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ENDOD1O94919 500 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 CHMLP26374 656 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 ALFQ53S48 1182 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 AARS2Q5JTZ9 985 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 C10orf67Q8IYJ2 551 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 RAPGEF5Q92565 580 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 THOC1Q96FV9 657 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 CPVLQ9H3G5 476 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 SERPINB13Q9UIV8 391 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 GTF2A1LQ9UNN4 478 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ZBTB12Q9Y330 459 aaPredicted RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 TSPOAP1O95153 1857 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ITIH6Q6UXX5 1313 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 LRRD1A4D1F6 860 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 GFPT2O94808 682 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 DDX5P17844 614 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 RASGRF1Q13972 1273 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 C10orf76Q5T2E6 689 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ANKS3Q6ZW76 656 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ATP11CQ8NB49 1132 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 SPATA18Q8TC71 538 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 HOXC10Q9NYD6 342 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 SUPT6HQ7KZ85 1726 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 PQBP1O60828 265 aaKnown RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 SERPINI2O75830 405 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 FANCCQ00597 558 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 KRT17Q04695 432 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 TMED2Q15363 201 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 RRM2BQ7LG56 351 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
DMD-228ENST00000541735 NFE2L3Q9Y4A8 694 aa6.79□□□□□ -1.32
DMD-228ENST00000541735 N6AMT1Q9Y5N5 214 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms