RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TMTC4Q5T4D3 741 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PDXDC1Q6P996 788 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 FIP1L1Q6UN15 594 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PPP1R21Q6ZMI0 780 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 HDGFL2Q7Z4V5 671 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SLC51BQ86UW2 128 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SNX32Q86XE0 403 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.517e-6■■■□□ 16.5
SNHG1-218ENST00000541615 IFT20Q8IY31 132 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SPICE1Q8N0Z3 855 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 CCDC89Q8N998 374 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 CCDC197Q8NCU1 140 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 OR7G1Q8NGA0 311 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ANGPTL6Q8NI99 470 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 AGAP11Q8TF27 550 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 STARD8Q92502 1023 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 DHX58Q96C10 678 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 GIMAP5Q96F15 307 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 MTMR9Q96QG7 549 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PANX2Q96RD6 677 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 IMPG2Q9BZV3 1241 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 RAB17Q9H0T7 212 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 VPS33BQ9H267 617 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 CAAP1Q9H8G2 361 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 TRPC7Q9HCX4 862 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ARMC1Q9NVT9 282 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 AIPL1Q9NZN9 384 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 DLGAP2Q9P1A6 1054 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 STOML1Q9UBI4 398 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 MTRF1LQ9UGC7 380 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 INTUQ9ULD6 942 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ZMYND8Q9ULU4 1186 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 TTF2Q9UNY4 1162 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SLC12A4Q9UP95 1085 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 EMILIN1Q9Y6C2 1016 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 TMEM94Q12767 1356 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 FGD6Q6ZV73 1430 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PLA2R1Q13018 1463 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 A0A088AWK7 358 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 VPS37CA5D8V6 355 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 TMEM114B3SHH9 223 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 H0Y3Z8 333 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 AP3B1O00203 1094 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DNM1LO00429 736 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 IKBKBO14920 756 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 AREL1O15033 823 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 MUSKO15146 869 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 HNRNPRO43390 633 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 FIBPO43427 364 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 AQRO60306 1485 aaKnown RBP eCLIP5.61□□□□□ -1.513e-14■■■■■ 46.6
SNHG1-218ENST00000541615 PDE5AO76074 875 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 FKBP9O95302 570 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ESRRBO95718 433 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 CYP1A2P05177 515 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 MYZAPP0CAP1 466 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 TNFRSF8P28908 595 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ECE1P42892 770 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 EPHB4P54760 987 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 NOP14P78316 857 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 KRT83P78385 493 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 PAK2Q13177 524 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 STK3Q13188 491 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 CDK13Q14004 1512 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 HLTFQ14527 1009 aaKnown RBP eCLIP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 R3HDM1Q15032 1099 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 EPHA7Q15375 998 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SF3B3Q15393 1217 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ZNF423Q2M1K9 1284 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 P3H1Q32P28 736 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 CNPY1Q3B7I2 92 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SGO2Q562F6 1265 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 FYB2Q5VWT5 728 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DENND2CQ68D51 928 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SIGIRRQ6IA17 410 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ARMCX5Q6P1M9 558 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DSTYKQ6XUX3 929 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 CCNI2Q6ZMN8 369 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 POGZQ7Z3K3 1410 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 PNMA8AQ86V59 439 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ST13P4Q8IZP2 240 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 NUP93Q8N1F7 819 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ZNF713Q8N859 430 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 PPFIBP2Q8ND30 876 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 FNDC8Q8TC99 324 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 RASSF5Q8WWW0 418 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 RUFY2Q8WXA3 655 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DNAJC9Q8WXX5 260 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 RPGRQ92834 1020 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ARHGEF2Q92974 986 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 CAVIN3Q969G5 261 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ABTB1Q969K4 478 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 RMDN1Q96DB5 314 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 ASIC4Q96FT7 647 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 GPATCH3Q96I76 525 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms