RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RMDN3Q96TC7 470 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 TCF25Q9BQ70 676 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 FBXO4Q9UKT5 387 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 TTC3P53804 2025 aa11.09□□□□□ -0.63
YBX3-211ENST00000541351 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 M0QZ92 97 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 TBC1D4O60343 1298 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 APPP05067 770 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 PROS1P07225 676 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 SCG2P13521 617 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 LAG3P18627 525 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 SHC2P98077 582 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 SLFN5Q08AF3 891 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 CELF3Q5SZQ8 465 aaKnown RBP11.08□□□□□ -0.64
YBX3-211ENST00000541351 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
YBX3-211ENST00000541351 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 SHDQ96IW2 340 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 C16orf70Q9BSU1 422 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 PCDHB7Q9Y5E2 793 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 NRCAMQ92823 1304 aa11.08□□□□□ -0.64
YBX3-211ENST00000541351 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 GSG1L2A8MUP6 293 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 LAMTOR5O43504 91 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 LRP3O75074 770 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 GGPS1O95749 300 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 ERVFC1P60507 584 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 HIC1Q14526 733 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 SMC1AQ14683 1233 aaKnown RBP11.07□□□□□ -0.64
YBX3-211ENST00000541351 LPIN1Q14693 890 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 TMC7Q7Z402 723 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 NXPE3Q969Y0 559 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 STRBPQ96SI9 672 aaKnown RBP11.07□□□□□ -0.64
YBX3-211ENST00000541351 TBC1D17Q9HA65 648 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
YBX3-211ENST00000541351 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
YBX3-211ENST00000541351 CHRNA1P02708 482 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 LGALS2P05162 132 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 SLC16A2P36021 539 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 MAGEA9P43362 315 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 HSDL1Q3SXM5 330 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 ODR4Q5SWX8 454 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
YBX3-211ENST00000541351 IER5Q5VY09 327 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 BCO2Q9BYV7 579 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 PUS7LQ9H0K6 701 aaKnown RBP11.06□□□□□ -0.64
YBX3-211ENST00000541351 KCNK12Q9HB15 430 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 HCFC2Q9Y5Z7 792 aa11.06□□□□□ -0.64
YBX3-211ENST00000541351 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 NR3C2P08235 984 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 CFHP08603 1231 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
YBX3-211ENST00000541351 KCNA4P22459 653 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 GIT2Q14161 759 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 IL31Q6EBC2 164 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 COLGALT1Q8NBJ5 622 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 STAMQ92783 540 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 KIF1BPQ96EK5 621 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 EPC1Q9H2F5 836 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 ZSCAN32Q9NX65 697 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 ABCB11O95342 1321 aa11.05□□□□□ -0.64
YBX3-211ENST00000541351 FANCMQ8IYD8 2048 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 FRYLO94915 3013 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 TBKBP1A7MCY6 615 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 SRFP11831 508 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 TRIM27P14373 513 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 PMLP29590 882 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 SARSP49591 514 aaKnown RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 PAK2Q13177 524 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 USH1GQ495M9 461 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 RHPN1Q8TCX5 695 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 SYTL5Q8TDW5 730 aaPredicted RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 GLG1Q92896 1179 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 TNPO1Q92973 898 aaKnown RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 TAAR1Q96RJ0 339 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 FAM126AQ9BYI3 521 aaPredicted RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 C1orf112Q9NSG2 853 aa11.04□□□□□ -0.64
YBX3-211ENST00000541351 MRPL11Q9Y3B7 192 aaKnown RBP11.04□□□□□ -0.64
YBX3-211ENST00000541351 HOXA2O43364 376 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 TOP1P11387 765 aaKnown RBP11.03□□□□□ -0.64
YBX3-211ENST00000541351 ATP5JP18859 108 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms