RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 RAVER2Q9HCJ3 691 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 EBAG9O00559 213 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 SNHG28P0DPA3 235 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 NF2P35240 595 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 RCAN1P53805 252 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC51Q96ER9 411 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 SLC39A2Q9NP94 309 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 FAM207AQ9NSI2 230 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 AFG3L2Q9Y4W6 797 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 PLS1Q14651 629 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 CDC37Q16543 378 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 MKL1Q969V6 931 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 TUBGCP2Q9BSJ2 902 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 CRACR2AQ9BSW2 395 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 NKRFO15226 690 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■□□□□ 10.8
SFSWAP-210ENST00000541286 PLCG1P19174 1290 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 TXKP42681 527 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 IRF2BP1Q8IU81 584 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 JAKMIP2Q96AA8 810 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 SLC10A4Q96EP9 437 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 MTA3Q9BTC8 594 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 PCDHA4Q9UN74 947 aa15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 REXO2Q9Y3B8 237 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-210ENST00000541286 LONP1P36776 959 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 NOC4LQ9BVI4 516 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 LACRTQ9GZZ8 138 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 RAB21Q9UL25 225 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 ABT1Q9ULW3 272 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 GNGT1P63211 74 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 ACTN3Q08043 901 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 HNRNPLLQ8WVV9 542 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 PAGR1Q9BTK6 254 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 MMRN2Q9H8L6 949 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 CXCR5P32302 372 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 IRAK1P51617 712 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 SLC7A5Q01650 507 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 NAALADL2Q58DX5 795 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 CABP7Q86V35 215 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 ANKRD13AQ8IZ07 590 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 SAR1BQ9Y6B6 198 aa15.79■□□□□ 0.12
SFSWAP-210ENST00000541286 GOLGA6CA6NDK9 693 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 PLEKP08567 350 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 GOLGA6DP0CG33 693 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 STAT2P52630 851 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 STK4Q13043 487 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 RNF187Q5TA31 235 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 GOLGA6AQ9NYA3 693 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 COL2A1P02458 1487 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 WHAMMP3Q1A5X7 153 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 SH2D3CQ8N5H7 860 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 CNOT6LQ96LI5 555 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 HPCAL4Q9UM19 191 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 PCDHA6Q9UN73 950 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 PCDHA8Q9Y5H6 950 aa15.78■□□□□ 0.12
SFSWAP-210ENST00000541286 FAM170AA1A519 330 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 MARCH6O60337 910 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 ATP2C2O75185 946 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC47Q96A33 483 aaKnown RBP15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 GOPCQ9HD26 462 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 SMARCAL1Q9NZC9 954 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 NID2Q14112 1375 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 RCCD1A6NED2 376 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 LGALS16A8MUM7 142 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 TULP1O00294 542 aaPredicted RBP15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 TRAPPC10P48553 1259 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 C2orf54Q08AI8 447 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 PDCLQ13371 301 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 SYDE2Q5VT97 1194 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 FAM76AQ8TAV0 307 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC42Q96M95 316 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 PCDHA1Q9Y5I3 950 aa15.77■□□□□ 0.12
SFSWAP-210ENST00000541286 STXBP3O00186 592 aa15.77■□□□□ 0.11
SFSWAP-210ENST00000541286 KRT86O43790 486 aa15.77■□□□□ 0.11
SFSWAP-210ENST00000541286 HERVK_113P62684 666 aa15.77■□□□□ 0.11
SFSWAP-210ENST00000541286 CYP4F22Q6NT55 531 aa15.77■□□□□ 0.11
SFSWAP-210ENST00000541286 SLC24A3Q9HC58 644 aa15.77■□□□□ 0.11
SFSWAP-210ENST00000541286 SMCO2A6NFE2 343 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 TRIM14Q14142 442 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 LRRC41Q15345 812 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 LRRC15Q8TF66 581 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms