RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CEP70Q8NHQ1 597 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 CCDC124Q96CT7 223 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 A6NJR5 290 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 TOM1L1O75674 476 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 GGPS1O95749 300 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 FSCBQ5H9T9 825 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 GRAMD4Q6IC98 578 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 KSR1Q8IVT5 923 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 SRRM1Q8IYB3 904 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SMARCA4-207ENST00000541122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■□□ 14.7
SMARCA4-207ENST00000541122 ATP1A1P05023 1023 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 ORC2Q13416 577 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 BYSLQ13895 437 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 KLHL38Q2WGJ6 581 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 RIOK1Q9BRS2 568 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 NDE1Q9NXR1 346 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 INTUQ9ULD6 942 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 DHX34Q14147 1143 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 PCGF5Q86SE9 256 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 RASGRP4Q8TDF6 673 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 CCT8L2Q96SF2 557 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 WDR11Q9BZH6 1224 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 MRPL46Q9H2W6 279 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 HPCAL4Q9UM19 191 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 MED14O60244 1454 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 LRRN2O75325 713 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 PRPSAP1Q14558 356 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 TEDDM1Q5T9Z0 273 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 TMCO4Q5TGY1 634 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 RAB44Q7Z6P3 723 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 POMGNT1Q8WZA1 660 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 TGS1Q96RS0 853 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 FAM167BQ9BTA0 163 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 A0A0G2JND7 137 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 TTC26A0AVF1 554 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 WDR46O15213 610 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 FOXP2O15409 715 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 ANO5Q75V66 913 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 MCF2L2Q86YR7 1114 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 NUDCD1Q96RS6 583 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 PCDHA1Q9Y5I3 950 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 SAMD9LQ8IVG5 1584 aa16.1■□□□□ 0.17
SMARCA4-207ENST00000541122 SLC30A9Q6PML9 568 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 CYTH2Q99418 400 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 PPARGC1AQ9UBK2 798 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 ARL2BPQ9Y2Y0 163 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 PLA2G4BP0C869 781 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 SRGAP2BP0DMP2 458 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 PPM1FP49593 454 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 DYDC2Q96IM9 177 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 NACC1Q96RE7 527 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 KIFC3Q9BVG8 833 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 PUS3Q9BZE2 481 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 L2HGDHQ9H9P8 463 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 LIMA1Q9UHB6 759 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 AGTP01019 485 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 TMEM191BP0C7N4 346 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 ARL4CP56559 192 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 GUCY1A3Q02108 690 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 AGBL2Q5U5Z8 902 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 TRIM56Q9BRZ2 755 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 HDAC6Q9UBN7 1215 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 LAMC1P11047 1609 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 FAM170AA1A519 330 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 TEX33O43247 280 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 BRAFP15056 766 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 CCND1P24385 295 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 INPP1P49441 399 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 MXI1P50539 228 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 BASP1P80723 227 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 CYP4A11Q02928 519 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 FBXW10Q5XX13 1052 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 DPP8Q6V1X1 898 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 LRRC43Q8N309 656 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
SMARCA4-207ENST00000541122 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 GYG1P46976 350 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 GABPAQ06546 454 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 PROSER3Q2NL68 480 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 NSMFQ6X4W1 530 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms