RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 E9PSI1 815 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 DYNC1LI2O43237 492 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 ZBED4O75132 1171 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 MICAL2O94851 1124 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 CYP2C9P11712 490 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 EEF2P13639 858 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 AKR1B1P15121 316 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 MPSTP25325 297 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 BRD2P25440 801 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 GRNP28799 593 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 IDH3AP50213 366 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 ERVK-21P61565 698 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 CTBSQ01459 385 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 ZP2Q05996 745 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 PKN1Q16512 942 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 FOXR1Q6PIV2 292 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 FIGNL1Q6PIW4 674 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 NOL8Q76FK4 1167 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 BMP8AQ7Z5Y6 402 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 TLK2Q86UE8 772 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 CCDC144CPQ8IYA2 1237 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 ANKRD35Q8N283 1001 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 PRPF38AQ8NAV1 312 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 CHST13Q8NET6 341 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 NEK9Q8TD19 979 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 GDPD5Q8WTR4 605 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 TRERF1Q96PN7 1200 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 TGS1Q96RS0 853 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 RAD9AQ99638 391 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 SLF1Q9BQI6 1058 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 UPF3BQ9BZI7 483 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 CRNKL1Q9BZJ0 848 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 FTOQ9C0B1 505 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 SUGCTQ9HAC7 445 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 ENAMQ9NRM1 1142 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 STIM2Q9P246 746 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 NOB1Q9ULX3 412 aaKnown RBP5.53□□□□□ -1.52
SNHG1-214ENST00000540865 RIPK3Q9Y572 518 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 A0A0G2JMZ2 1700 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 LRRC37A2A6NM11 1700 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 RIF1Q5UIP0 2472 aaKnown RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 ZNF318Q5VUA4 2279 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 PNMA6EA0A0J9YXQ4 647 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 LCHNA4D1U4 455 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 ASB14A6NK59 587 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 H3BRB1 525 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 C2CD2LO14523 706 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 OPLAHO14841 1288 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 EFSO43281 561 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 GNAI2P04899 355 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 IQCF3P0C7M6 154 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 FAM157BP0CG42 384 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 CYP2D6P10635 497 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 FGFR3P22607 806 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 KCNJ6P48051 423 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 OAZ1P54368 228 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 PSMC6P62333 389 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 HERC4Q5GLZ8 1057 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 FAM83BQ5T0W9 1011 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 SAMD5Q5TGI4 173 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 IQSEC1Q6DN90 963 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 SPRED2Q7Z698 418 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 RAB44Q7Z6P3 723 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 ADHFE1Q8IWW8 467 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 FAM133AQ8N9E0 248 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 PRSS33Q8NF86 280 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 TUT1Q9H6E5 874 aaKnown RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 SLC38A10Q9HBR0 1119 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 DCP1AQ9NPI6 582 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 TRMT13Q9NUP7 481 aaKnown RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
SNHG1-214ENST00000540865 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 ATXN7L1Q9ULK2 861 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-214ENST00000540865 GJB5O95377 273 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 CT47B1P0C2W7 299 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 CDK8P49336 464 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 WDR5P61964 334 aaKnown RBP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 CNTN2Q02246 1040 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 PTPN11Q06124 597 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 BFSP2Q13515 415 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 COL19A1Q14993 1142 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 HIF1AQ16665 826 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 PTPROQ16827 1216 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 IER5Q5VY09 327 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 RGL4Q8IZJ4 473 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 CPXCR1Q8N123 301 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 ARHGAP45Q92619 1136 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 ANKS1AQ92625 1134 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 PABPC5Q96DU9 382 aaKnown RBP5.51□□□□□ -1.53
SNHG1-214ENST00000540865 DYNLL2Q96FJ2 89 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 IRF2BPLQ9H1B7 796 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 ANTXR1Q9H6X2 564 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms