RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 HTRA4P83105 476 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 PKN1Q16512 942 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 CEP55Q53EZ4 464 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 BLOC1S2Q6QNY1 142 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 IFIH1Q9BYX4 1025 aaKnown RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 FAM49AQ9H0Q0 323 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
MSRB3-209ENST00000540804 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-209ENST00000540804 MUC3AQ02505 3323 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 CUL9Q8IWT3 2517 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 FAM86B1E9PN63 330 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 MAFGO15525 162 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 CCNE2O96020 404 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 FOSP01100 380 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-209ENST00000540804 FAM86B2P0C5J1 330 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 SCG2P13521 617 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 SREBF1P36956 1147 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 TMEM62Q0P6H9 643 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 LPIN1Q14693 890 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 RASGRP4Q8TDF6 673 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 TOP1MTQ969P6 601 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
MSRB3-209ENST00000540804 INSL6Q9Y581 213 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
MSRB3-209ENST00000540804 NFASCO94856 1347 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 MBLAC1A4D2B0 266 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 MEIS1O00470 390 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 BMP1P13497 986 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 ZNF76P36508 570 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 UHRF1Q96T88 793 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 AGO3Q9H9G7 860 aaKnown RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
MSRB3-209ENST00000540804 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
MSRB3-209ENST00000540804 IGLV3-22A0A075B6J6 115 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 STAT5BP51692 787 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 RCAN1P53805 252 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 AP3B2Q13367 1082 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 RPAINQ86UA6 219 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
MSRB3-209ENST00000540804 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 CRYGNQ8WXF5 182 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
MSRB3-209ENST00000540804 DHX15O43143 795 aaKnown RBP16.49■□□□□ 0.23
MSRB3-209ENST00000540804 PRPF3O43395 683 aaKnown RBP16.49■□□□□ 0.23
MSRB3-209ENST00000540804 ATG7O95352 703 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
MSRB3-209ENST00000540804 NTRK3Q16288 839 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 EPC2Q52LR7 807 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 FBXO47Q5MNV8 452 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 CCDC60Q8IWA6 550 aaPredicted RBP16.49■□□□□ 0.23
MSRB3-209ENST00000540804 LINC01599Q8WXQ3 324 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 AGXT2Q9BYV1 514 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 NID2Q14112 1375 aa16.49■□□□□ 0.23
MSRB3-209ENST00000540804 RRN3P2A6NIE6 340 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 ENPP3O14638 875 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 EDIL3O43854 480 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 DTNBO60941 627 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 ATP4AP20648 1035 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
MSRB3-209ENST00000540804 CD52P31358 61 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-209ENST00000540804 ABHD15Q6UXT9 468 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 PLPPR4Q7Z2D5 763 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 TRMT1LQ7Z2T5 733 aaKnown RBP16.48■□□□□ 0.23
MSRB3-209ENST00000540804 RSPH3Q86UC2 560 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 RTN4RL1Q86UN2 441 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-209ENST00000540804 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 APBB2Q92870 758 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 ZMYND12Q9H0C1 365 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
MSRB3-209ENST00000540804 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 CCDC196A0A1B0GTZ2 297 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 BACH1O14867 736 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 CYP3A4P08684 503 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 REXO1Q8N1G1 1221 aaKnown RBP16.47■□□□□ 0.23
MSRB3-209ENST00000540804 HLA-CQ95604 372 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 CDHR5Q9HBB8 845 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 SIP14410 1827 aa16.47■□□□□ 0.23
MSRB3-209ENST00000540804 MICAL3Q7RTP6 2002 aa16.46■□□□□ 0.23
MSRB3-209ENST00000540804 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
MSRB3-209ENST00000540804 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
MSRB3-209ENST00000540804 IPO5O00410 1097 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms