RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TSPY3P0CV98 308 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 TSPY8P0CW00 308 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 EDNRBP24530 442 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 THPOP40225 353 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 NRIP1P48552 1158 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 NOVP48745 357 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 PSEN2P49810 448 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 IKQ13123 557 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 ADGRD2Q7Z7M1 963 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 CCDC105Q8IYK2 499 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 DNERQ8NFT8 737 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 RUBCNQ92622 972 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 WNT8BQ93098 351 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 LSG1Q9H089 658 aaKnown RBP10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 CCPG1Q9ULG6 757 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 GREB1LQ9C091 1923 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 ADGRA3Q8IWK6 1321 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 TSPY2A6NKD2 308 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 HAS3O00219 553 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 CAND2O75155 1236 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 ICAM1P05362 532 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 CYP21A2P08686 494 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 KIAA0753Q2KHM9 967 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 CCDC62Q6P9F0 684 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 RBM23Q86U06 439 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 SERINC5Q86VE9 423 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 CYP2W1Q8TAV3 490 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 ATP8B4Q8TF62 1192 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 NEK1Q96PY6 1258 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 CDCA3Q99618 268 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 HINFPQ9BQA5 517 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 RTP3Q9BQQ7 232 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 ALG1Q9BT22 464 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 TLE6Q9H808 572 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZSWIM5Q9P217 1185 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 ISY1Q9ULR0 285 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 NEDD4P46934 1319 aa10.3□□□□□ -0.76
TRAPPC1-202ENST00000540486 PLIN4Q96Q06 1357 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 MAP3K7O43318 606 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 CDC45O75419 566 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 ARIH2O95376 493 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 ITGB1P05556 798 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 SRGAP2BP0DMP2 458 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 AOC1P19801 751 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 DNAJB1P25685 340 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 SLC1A4P43007 532 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 BTG3Q14201 252 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 NECTIN1Q15223 517 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 IMMTQ16891 758 aaKnown RBP10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 TMEM184AQ6ZMB5 413 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 DTWD2Q8NBA8 298 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZNF689Q96CS4 500 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 CHAMP1Q96JM3 812 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 S1PR5Q9H228 398 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 FAM208BQ5VWN6 2430 aa10.29□□□□□ -0.76
TRAPPC1-202ENST00000540486 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 B4E1Z4 1266 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 CSPG5O95196 566 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 F2P00734 622 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 ARHGAP1Q07960 439 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZC3H14Q6PJT7 736 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 POF1BQ8WVV4 589 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 RNF41Q9H4P4 317 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 RBM8AQ9Y5S9 174 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 OTOGLQ3ZCN5 2332 aa10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 FASNP49327 2511 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-202ENST00000540486 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 E7EWF7 191 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 NFIBO00712 420 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 HOXB8P17481 243 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 MCCP23508 829 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms