RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 RFC2P35250 354 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 THPOP40225 353 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 STAT5BP51692 787 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
UBE3B-212ENST00000540230 PLCB4Q15147 1175 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 GRIK4Q16099 956 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 GPR153Q6NV75 609 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 RUFY4Q6ZNE9 571 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 PIK3AP1Q6ZUJ8 805 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 WASF1Q92558 559 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 AZI2Q9H6S1 392 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 TBC1D22BQ9NU19 505 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 SIP14410 1827 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 PTPRSQ13332 1948 aa17.08■□□□□ 0.32
UBE3B-212ENST00000540230 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 SLC37A4O43826 429 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 PFKMP08237 780 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 CTSHP09668 335 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 INSRRP14616 1297 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 CYP3A7P24462 503 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 IGBP1P78318 339 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 RABEP1Q15276 862 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 LETM2Q2VYF4 491 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 Q4G0T1 1027 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 PLPPR4Q7Z2D5 763 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 TRAPPC12Q8WVT3 735 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 SLC5A5Q92911 643 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
UBE3B-212ENST00000540230 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 BACH1O14867 736 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 GNAT1P11488 350 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ATP4AP20648 1035 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 PBX2P40425 430 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 KRT40Q6A162 431 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 SWSAP1Q6NVH7 229 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 DEFB123Q8N688 67 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ETNPPLQ8TBG4 499 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 FAM161BQ96MY7 647 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 FTOQ9C0B1 505 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 TRPC6Q9Y210 931 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 MYH9P35579 1960 aaKnown RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 CXCL10P02778 98 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 MMP1P03956 469 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 KRT2P35908 639 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 MIS18BP1Q6P0N0 1132 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 MOXD1Q6UVY6 613 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 PBX4Q9BYU1 374 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 TTYH1Q9H313 450 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 UNC45AQ9H3U1 944 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
UBE3B-212ENST00000540230 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
UBE3B-212ENST00000540230 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 WNT7AO00755 349 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 CHMP2AO43633 222 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 PSMD10O75832 226 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 DNAJB2P25686 324 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 KRT76Q01546 638 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 LRCH2Q5VUJ6 765 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 PDXDC2PQ6P474 469 aa17.05■□□□□ 0.32
UBE3B-212ENST00000540230 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
UBE3B-212ENST00000540230 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-212ENST00000540230 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
UBE3B-212ENST00000540230 POTEB3A0JP26 581 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 GAS7O60861 476 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 UGCGQ16739 394 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 FAM160B1Q5W0V3 765 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 POTEBQ6S5H4 581 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
UBE3B-212ENST00000540230 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-212ENST00000540230 RIT2Q99578 217 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 LLPHQ9BRT6 129 aaKnown RBP17.04■□□□□ 0.32
UBE3B-212ENST00000540230 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 MTIF3Q9H2K0 278 aaKnown RBP17.04■□□□□ 0.32
UBE3B-212ENST00000540230 MTMR10Q9NXD2 777 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 GABBR1Q9UBS5 961 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 PCDHA10Q9Y5I2 948 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-212ENST00000540230 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
UBE3B-212ENST00000540230 IGSF9BQ9UPX0 1349 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 ZBTB42B2RXF5 422 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
UBE3B-212ENST00000540230 RABGGTBP53611 331 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms