RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SEPT11Q9NVA2 429 aaKnown RBP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 CHORDC1Q9UHD1 332 aaPredicted RBP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 CLRN2A0PK11 232 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 CETN3O15182 167 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 COG2Q14746 738 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 ASIC2Q16515 512 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 RUFY1Q96T51 708 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 STIM2Q9P246 746 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 AFF2P51816 1311 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 EML1O00423 815 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 AKAP3O75969 853 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 PPP1R2P41236 205 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 HLTFQ14527 1009 aaKnown RBP eCLIP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 ASTE1Q2TB18 679 aaPredicted RBP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 IQCEQ6IPM2 695 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 C15orf52Q6ZUT6 534 aaKnown RBP15.01□□□□□ -0.01
BNIP3-202ENST00000540159 MED4Q9NPJ6 270 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 CEP72Q9P209 647 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 FAM184BQ9ULE4 1060 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 SAMM50Q9Y512 469 aa15.01□□□□□ -0.01
BNIP3-202ENST00000540159 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 ZEB2O60315 1214 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 ABCB4P21439 1286 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 HNRNPH3P31942 346 aaKnown RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 LLGL1Q15334 1064 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 TRIM59Q8IWR1 403 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 NT5C3AQ9H0P0 336 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 SERPING1P05155 500 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 TCP1P17987 556 aaKnown RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 SF3A3Q12874 501 aaKnown RBP eCLIP15□□□□□ -0.015e-13■■■□□ 17.8
BNIP3-202ENST00000540159 ZNF571Q7Z3V5 609 aaPredicted RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 FAM76AQ8TAV0 307 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 ELMO3Q96BJ8 720 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 CCDC43Q96MW1 224 aaKnown RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 FAM107BQ9H098 131 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 ARMCX3Q9UH62 379 aaPredicted RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 FEZ2Q9UHY8 353 aaPredicted RBP15□□□□□ -0.01
BNIP3-202ENST00000540159 DNM3Q9UQ16 869 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 PCDHA2Q9Y5H9 948 aa15□□□□□ -0.01
BNIP3-202ENST00000540159 NDUFB10O96000 172 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 MMP10P09238 476 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 HOXD13P35453 343 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 SLC12A3P55017 1021 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 CDK17Q00537 523 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 GIT2Q14161 759 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 RRP1BQ14684 758 aaKnown RBP14.99□□□□□ -0.01
BNIP3-202ENST00000540159 AENQ8WTP8 325 aaKnown RBP14.99□□□□□ -0.01
BNIP3-202ENST00000540159 TRIM31Q9BZY9 425 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 TCP10L2B9ZVM9 353 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 CEP104O60308 925 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 GFPT2O94808 682 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 SMARCA1P28370 1054 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 COPB2P35606 906 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 CCT5P48643 541 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 SP8Q8IXZ3 490 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 OR2W6PQ8NHA6 318 aa14.99□□□□□ -0.01
BNIP3-202ENST00000540159 RBM46Q8TBY0 533 aaKnown RBP14.99□□□□□ -0.01
BNIP3-202ENST00000540159 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
BNIP3-202ENST00000540159 ATF5Q9Y2D1 282 aaPredicted RBP14.99□□□□□ -0.01
BNIP3-202ENST00000540159 SPATA31C1P0DKV0 1188 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 CHRNA5P30532 468 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 CYP2J2P51589 502 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 TUBB4BP68371 445 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 PDCLQ13371 301 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
BNIP3-202ENST00000540159 CFAP221Q4G0U5 840 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 FBXO11Q86XK2 927 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
BNIP3-202ENST00000540159 ZBTB21Q9ULJ3 1066 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 A0A1W2PRG0 241 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 TARSL2A2RTX5 802 aaKnown RBP14.98□□□□□ -0.01
BNIP3-202ENST00000540159 GRID2IPA4D2P6 1211 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 MSH4O15457 936 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 LRRN2O75325 713 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 UCHL3P15374 230 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 NOVP48745 357 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 PSMD2Q13200 908 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 PRPF4BQ13523 1007 aaKnown RBP14.98□□□□□ -0.01
BNIP3-202ENST00000540159 SLC18A3Q16572 532 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 EXOC3L4Q17RC7 722 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 SRLQ86TD4 932 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 PROM2Q8N271 834 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
BNIP3-202ENST00000540159 MCM3P25205 808 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 MYCT1Q8N699 235 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 ZIM3Q96PE6 472 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 KCNMB3Q9NPA1 279 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 GCNT4Q9P109 453 aa14.98□□□□□ -0.01
BNIP3-202ENST00000540159 SWAP70Q9UH65 585 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms