RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ZBTB46Q86UZ6 589 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 SMAP1Q8IYB5 467 aaPredicted RBP7.39□□□□□ -1.23
MRE11-209ENST00000540013 FAM168AQ92567 244 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 COPS5Q92905 334 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 MTMR8Q96EF0 704 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 SMAD5Q99717 465 aaKnown RBP7.39□□□□□ -1.23
MRE11-209ENST00000540013 AS3MTQ9HBK9 375 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 SLC5A4Q9NY91 659 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 FAM53CQ9NYF3 392 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 NOB1Q9ULX3 412 aaKnown RBP7.39□□□□□ -1.23
MRE11-209ENST00000540013 CROCC2H7BZ55 1655 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 ZNF142P52746 1687 aaPredicted RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 A0A1W2PQC6 194 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 A0A1W2PQD8 194 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 A0A1W2PQU0 124 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 SCG5P05408 212 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 SNRPB2P08579 225 aaKnown RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 CORO7P57737 925 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 PPP2R2AP63151 447 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 SCRN1Q12765 414 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 PICALMQ13492 652 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 ALFQ53S48 1182 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 SLCO6A1Q86UG4 719 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 C1orf131Q8NDD1 294 aaKnown RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 AARSD1Q9BTE6 412 aaKnown RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
MRE11-209ENST00000540013 SPATA9Q9BWV2 254 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 CRTAC1Q9NQ79 661 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 USP25Q9UHP3 1055 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 GPR160Q9UJ42 338 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 ZNF180Q9UJW8 692 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 MYO3AQ8NEV4 1616 aa7.38□□□□□ -1.23
MRE11-209ENST00000540013 KDM5DQ9BY66 1539 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 NPHP3-ACAD11A0A0J9YXS1 232 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 PRPF3O43395 683 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 EPB41L2O43491 1005 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 ADCY3O60266 1144 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 L1CAMP32004 1257 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 ARL4AP40617 200 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 CASP2P42575 452 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 ITKQ08881 620 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 FZD5Q13467 585 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 LAPTM5Q13571 262 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 KCTD2Q14681 263 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 CBX2Q14781 532 aaPredicted RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 FNDC3BQ53EP0 1204 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 RNF219Q5W0B1 726 aaPredicted RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 ICE2Q659A1 982 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 E4F1Q66K89 784 aaPredicted RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 CXorf57Q6NSI4 855 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 ENAHQ8N8S7 591 aaPredicted RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 KCTD13Q8WZ19 329 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 IPO9Q96P70 1041 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 MCMBPQ9BTE3 642 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 SLC6A17Q9H1V8 727 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 OBP2AQ9NY56 170 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 EBF1Q9UH73 591 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 DAAM1Q9Y4D1 1078 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 SPEF1Q9Y4P9 236 aa7.37□□□□□ -1.23
MRE11-209ENST00000540013 RNF17Q9BXT8 1623 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 EIF2AK4Q9P2K8 1649 aaKnown RBP7.37□□□□□ -1.23
MRE11-209ENST00000540013 PTPRKQ15262 1439 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 TRAV20A0A0B4J274 112 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 PLD2O14939 933 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 ABLIM3O94929 683 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 U2AF1L5P0DN76 240 aaPredicted RBP7.36□□□□□ -1.23
MRE11-209ENST00000540013 FGFR1P11362 822 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 KCNJ6P48051 423 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 ERVFC1P60507 584 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 U2AF1Q01081 240 aaKnown RBP eCLIP7.36□□□□□ -1.232e-8■■■■■ 32.6
MRE11-209ENST00000540013 SIM2Q14190 667 aaPredicted RBP7.36□□□□□ -1.23
MRE11-209ENST00000540013 HSF5Q4G112 596 aaPredicted RBP7.36□□□□□ -1.23
MRE11-209ENST00000540013 IL31Q6EBC2 164 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 STRA8Q7Z7C7 330 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 DRC7Q8IY82 874 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 CPXCR1Q8N123 301 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 PJA1Q8NG27 643 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 WDR66Q8TBY9 1149 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 MMP19Q99542 508 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 SARGQ9BW04 601 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 SP110Q9HB58 689 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 NCOA5Q9HCD5 579 aaKnown RBP7.36□□□□□ -1.23
MRE11-209ENST00000540013 PRDM11Q9NQV5 511 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 INTS7Q9NVH2 962 aaKnown RBP7.36□□□□□ -1.23
MRE11-209ENST00000540013 LUZP4Q9P127 313 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 SHANK2Q9UPX8 1470 aa7.36□□□□□ -1.23
MRE11-209ENST00000540013 NCOA1Q15788 1441 aa7.35□□□□□ -1.23
MRE11-209ENST00000540013 FGD6Q6ZV73 1430 aa7.35□□□□□ -1.23
MRE11-209ENST00000540013 ZC3H13Q5T200 1668 aaKnown RBP7.35□□□□□ -1.23
MRE11-209ENST00000540013 DNMT1P26358 1616 aaKnown RBP7.35□□□□□ -1.23
MRE11-209ENST00000540013 CAMSAP1Q5T5Y3 1602 aa7.35□□□□□ -1.23
MRE11-209ENST00000540013 CEP170BQ9Y4F5 1589 aaPredicted RBP7.35□□□□□ -1.23
MRE11-209ENST00000540013 ANP32CO43423 234 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms