RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PSMC6P62333 389 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 STK4Q13043 487 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
COPS3-212ENST00000539941 STXBP2Q15833 593 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 TPD52L1Q16890 204 aaPredicted RBP18.77■□□□□ 0.6
COPS3-212ENST00000539941 CDKAL1Q5VV42 579 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 TPH2Q8IWU9 490 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 DRC7Q8IY82 874 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 SENP7Q9BQF6 1050 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 TXNRD2Q9NNW7 524 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 PANK4Q9NVE7 773 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 LYPLA2O95372 231 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 KRT18P05783 430 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 CDK11BP21127 795 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 ERVK-24P63145 666 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 COASYQ13057 564 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 ZNF746Q6NUN9 644 aaPredicted RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 FOXR2Q6PJQ5 311 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 GUF1Q8N442 669 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 KIAA0895Q8NCT3 520 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 MPHOSPH6Q99547 160 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 LXNQ9BS40 222 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 KCND2Q9NZV8 630 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 PKD2L1Q9P0L9 805 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 LOC102724159A0A0B4J2E5 919 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 WDR64B1ANS9 1081 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 DDX39AO00148 427 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 PDHXO00330 501 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 PEX10O60683 326 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 FCER1AP12319 257 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 EDNRBP24530 442 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 CCNE1P24864 410 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 ICAM3P32942 547 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 UBASH3AP57075 661 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 SPAG1Q07617 926 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 PWP2Q15269 919 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 ARSHQ5FYA8 562 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 NOC3LQ8WTT2 800 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 BRI3BPQ8WY22 251 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 BBXQ8WY36 941 aaPredicted RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 SAMSN1Q9NSI8 373 aaKnown RBP18.76■□□□□ 0.59
COPS3-212ENST00000539941 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
COPS3-212ENST00000539941 SPATA31C2B4DYI2 1134 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 BTBD19C9JJ37 291 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 RGS20O76081 388 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 CCNA1P78396 465 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 KCTD2Q14681 263 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 FAM26FQ5R3K3 315 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 PAXIP1Q6ZW49 1069 aaPredicted RBP18.75■□□□□ 0.59
COPS3-212ENST00000539941 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 SMCR8Q8TEV9 937 aaPredicted RBP18.75■□□□□ 0.59
COPS3-212ENST00000539941 P2RX5Q93086 422 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 CTAGE1Q96RT6 745 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 MAPK8IP1Q9UQF2 711 aa18.75■□□□□ 0.59
COPS3-212ENST00000539941 AOC2O75106 756 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 ATP9AO75110 1047 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 KCNA2P16389 499 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
COPS3-212ENST00000539941 GRM1Q13255 1194 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 GIT2Q14161 759 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 Q3C1V9 767 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 SLC39A2Q9NP94 309 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 IMPACTQ9P2X3 320 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 ASTN1O14525 1302 aa18.74■□□□□ 0.59
COPS3-212ENST00000539941 MAP2K2P36507 400 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 HUNKP57058 714 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 MAP2K1Q02750 393 aaPredicted RBP18.73■□□□□ 0.59
COPS3-212ENST00000539941 TTI2Q6NXR4 508 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 GPRC5AQ8NFJ5 357 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 MMP19Q99542 508 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 THAP9Q9H5L6 903 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 DBR1Q9UK59 544 aaKnown RBP18.73■□□□□ 0.59
COPS3-212ENST00000539941 SAMM50Q9Y512 469 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 DNAJC25-GNG10A0A024R161 153 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 CYP2C8P10632 490 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 GAP43P17677 238 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 CENPPQ6IPU0 288 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 RINT1Q6NUQ1 792 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 BANK1Q8NDB2 785 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 ANKRD20A12PQ8NF67 263 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 PIGOQ8TEQ8 1089 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 PARK7Q99497 189 aaKnown RBP18.73■□□□□ 0.59
COPS3-212ENST00000539941 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 WRAP73Q9P2S5 460 aaPredicted RBP18.73■□□□□ 0.59
COPS3-212ENST00000539941 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
COPS3-212ENST00000539941 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
COPS3-212ENST00000539941 CCNE2O96020 404 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 PSMC5P62195 406 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 HERC4Q5GLZ8 1057 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms