RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 GPHNQ9NQX3 736 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDP2Q9P2J9 529 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NARFQ9UHQ1 456 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FBXO9Q9UK97 447 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NEDD4P46934 1319 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DOCK2Q92608 1830 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCT8L1PA6NM43 557 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GNPATO15228 680 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ENDOUP21128 410 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FUT4P22083 530 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GSTT1P30711 240 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CA8P35219 290 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RAB15P59190 212 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ITGB3BPQ13352 177 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ITGA7Q13683 1181 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SUZ12Q15022 739 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DUS1LQ6P1R4 473 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC2A7Q6PXP3 512 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CACNA2D4Q7Z3S7 1137 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IQCKQ8N0W5 287 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ESX1Q8N693 406 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ARL8AQ96BM9 186 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TUBGCP5Q96RT8 1024 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 STRBPQ96SI9 672 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TAOK3Q9H2K8 898 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SAMSN1Q9NSI8 373 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MKS1Q9NXB0 559 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SRP68Q9UHB9 627 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCNL1Q9UK58 526 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RCOR1Q9UKL0 485 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FADS3Q9Y5Q0 445 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ADGRG1Q9Y653 693 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TTC34A8MYJ7 566 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 H3BQV1 296 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PFDN1O60925 122 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 STAM2O75886 525 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CDC25CP30307 473 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MTTPP55157 894 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RESTQ13127 1097 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 BOLA3Q53S33 107 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 IFFO2Q5TF58 517 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 KLC3Q6P597 504 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RALYLQ86SE5 291 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TBC1D10CQ8IV04 446 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ARFGAP2Q8N6H7 521 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ENDOVQ8N8Q3 282 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DDX27Q96GQ7 796 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 EPB41L4AQ9HCS5 686 aaPredicted RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF804BA4D1E1 1349 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 WDR19Q8NEZ3 1342 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NQO1P15559 274 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 POLE2P56282 527 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 HPCAP84074 193 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 FAM160A1Q05DH4 1040 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SAFBQ15424 915 aaKnown RBP eCLIP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PDCD4Q53EL6 469 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SLC44A4Q53GD3 710 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SLC10A5Q5PT55 438 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 POTEEQ6S8J3 1075 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RUFY4Q6ZNE9 571 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CEP128Q6ZU80 1094 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MMGT1Q8N4V1 131 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SCAIQ8N9R8 606 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NKX2-3Q8TAU0 364 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CELF1Q92879 486 aaKnown RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GJD4Q96KN9 370 aaPredicted RBP6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CARD9Q9H257 536 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SLC12A6Q9UHW9 1150 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZMYM6O95789 1325 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 COL24A1Q17RW2 1714 aa6.27□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZPR1O75312 459 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ITGA2BP08514 1039 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PTPN2P17706 415 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NR1D1P20393 614 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF131P52739 623 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NLRP12P59046 1061 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TUBA4AP68366 448 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GUCY1B3Q02153 619 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SYDE2Q5VT97 1194 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RNF220Q5VTB9 566 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PAPD7Q5XG87 772 aaKnown RBP6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TMEM154Q6P9G4 183 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 C11orf74Q86VG3 221 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DZIP1Q86YF9 867 aaKnown RBP6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CENPTQ96BT3 561 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 LENG1Q96BZ8 264 aaPredicted RBP6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZMAT2Q96NC0 199 aaKnown RBP6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SPATA16Q9BXB7 569 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NYXQ9GZU5 481 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 EPB41L1Q9H4G0 881 aa6.26□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ARMT1Q9H993 441 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms