RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 WNT8AQ9H1J5 351 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 LAMA2P24043 3122 aaKnown RBP17.8■□□□□ 0.44
RPAIN-206ENST00000539417 H3BQV1 296 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 BACH1O14867 736 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 TIMP1P01033 207 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 RAG1P15918 1043 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 CCL23P55773 120 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 ADAM17P78536 824 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
RPAIN-206ENST00000539417 TRMT1LQ7Z2T5 733 aaKnown RBP17.79■□□□□ 0.44
RPAIN-206ENST00000539417 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 LMBR1Q8WVP7 490 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 VWCEQ96DN2 955 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
RPAIN-206ENST00000539417 MTMR9Q96QG7 549 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 ZNF302Q9NR11 478 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 DISC1Q9NRI5 854 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 ERAP1Q9NZ08 941 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-206ENST00000539417 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 PCDHA10Q9Y5I2 948 aa17.79■□□□□ 0.44
RPAIN-206ENST00000539417 ZNF862O60290 1169 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 SPIRE1Q08AE8 756 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 TRIM71Q2Q1W2 868 aaKnown RBP17.78■□□□□ 0.44
RPAIN-206ENST00000539417 TTC38Q5R3I4 469 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 MARCH8Q5T0T0 291 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 PLPPR4Q7Z2D5 763 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 SCLYQ96I15 445 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 FAM20AQ96MK3 541 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 AZI2Q9H6S1 392 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 PCDHB6Q9Y5E3 794 aa17.78■□□□□ 0.44
RPAIN-206ENST00000539417 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
RPAIN-206ENST00000539417 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 WDR64B1ANS9 1081 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 NEMFO60524 1076 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 SYT1P21579 422 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 IGBP1P78318 339 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 RUFY4Q6ZNE9 571 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 FERMT3Q86UX7 667 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-206ENST00000539417 C4orf32Q8N8J7 132 aa17.77■□□□□ 0.44
RPAIN-206ENST00000539417 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
RPAIN-206ENST00000539417 IGSF9BQ9UPX0 1349 aa17.77■□□□□ 0.43
RPAIN-206ENST00000539417 SCN5AQ14524 2016 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-206ENST00000539417 TBX3O15119 743 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 PSAPP07602 524 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 INSRRP14616 1297 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 CSF2RAP15509 400 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 PPFIA1Q13136 1202 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 GRIK4Q16099 956 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 CALCRLQ16602 461 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 ATP6V0A1Q93050 837 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 WRAP73Q9P2S5 460 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-206ENST00000539417 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
RPAIN-206ENST00000539417 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TMEM150BA6NC51 233 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 ZBTB42B2RXF5 422 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 STBD1O95210 358 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TXKP42681 527 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 PPP2R5CQ13362 524 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 GPNMBQ14956 572 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 FAM160B1Q5W0V3 765 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 C16orf59Q7L2K0 433 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 SERINC5Q86VE9 423 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 BANK1Q8NDB2 785 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 LBHD1Q9BQE6 289 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-206ENST00000539417 OSBPL7Q9BZF2 842 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TRPC6Q9Y210 931 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 MARCH6O60337 910 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 ACRP10323 421 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 JAK3P52333 1124 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 PTK7Q13308 1070 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 NCAPH2Q6IBW4 605 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 ATP8B4Q8TF62 1192 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 UBE2OQ9C0C9 1292 aaKnown RBP17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-206ENST00000539417 TCEAL9Q9UHQ7 104 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
RPAIN-206ENST00000539417 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 MYH9P35579 1960 aaKnown RBP17.74■□□□□ 0.43
RPAIN-206ENST00000539417 CKBP12277 381 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 SFNP31947 248 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 SLFN12Q8IYM2 578 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms