RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ASTN1O14525 1302 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FAM237AA0A1B0GTK4 181 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SYCE3A1L190 88 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ARHGEF35A5YM69 484 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 EML1O00423 815 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RGS20O76081 388 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 HOXC6P09630 235 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 KCNA2P16389 499 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CYP2C19P33261 490 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ACTR2P61160 394 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PSMC5P62195 406 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CCL14Q16627 93 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZSCAN23Q3MJ62 389 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PRAMEF19Q5SWL8 479 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SWSAP1Q6NVH7 229 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CATSPER3Q86XQ3 398 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 OR6J1Q8NGC5 347 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MORC4Q8TE76 937 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LARP4BQ92615 738 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 STAMQ92783 540 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FGD4Q96M96 766 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SPC25Q9HBM1 224 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PRDM10Q9NQV6 1147 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RGL1Q9NZL6 768 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GABBR1Q9UBS5 961 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SRRDQ9UH36 339 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 E9PMD0 336 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ADCY3O60266 1144 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MED24O75448 989 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CCDC192P0DO97 292 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MUTP22033 750 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PRMT2P55345 433 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CHMP4BP1P59074 171 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ASIC1P78348 528 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SEMA3FQ13275 785 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GRB10Q13322 594 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MCM6Q14566 821 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POSTNQ15063 836 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CCDC144BQ3MJ40 725 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 COL13A1Q5TAT6 717 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PDXDC2PQ6P474 469 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 METTL7BQ6UX53 244 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RAD54LQ92698 747 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LXNQ9BS40 222 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RMND1Q9NWS8 449 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MCM3APO60318 1980 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ZNF236Q9UL36 1845 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 A0A087WWV3 80 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SLITRK3O94933 977 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 IDEP14735 1019 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 STAT5BP51692 787 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SP2Q02086 613 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PNOCQ13519 176 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 XKR9Q5GH70 373 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TAPT1Q6NXT6 567 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 USP6NLQ92738 828 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 COPS5Q92905 334 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PNMA5Q96PV4 448 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BLZF1Q9H2G9 400 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
TNFRSF1A-211ENST00000538363 A0A087X0B3 334 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BIN1O00499 593 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms