RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 PDS5AQ29RF7 1337 aaKnown RBP17.77■□□□□ 0.43
KDM2B-207ENST00000538243 TXNDC9O14530 226 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 ATF2P15336 505 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 CDK8P49336 464 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 SNAP25P60880 206 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 SGO2Q562F6 1265 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 RUNDC3BQ96NL0 473 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
KDM2B-207ENST00000538243 CCSER1Q9C0I3 900 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
KDM2B-207ENST00000538243 KIRREL3Q8IZU9 778 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 ZNF653Q96CK0 615 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 MTA3Q9BTC8 594 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 CELF4Q9BZC1 486 aaKnown RBP17.76■□□□□ 0.43
KDM2B-207ENST00000538243 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 BARHL2Q9NY43 387 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 WDR91A4D1P6 747 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 CSF1RP07333 972 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 MYL7Q01449 175 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 CTAGE3PQ8IX95 158 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 MDM1Q8TC05 714 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 ZNF148Q9UQR1 794 aa17.76■□□□□ 0.43
KDM2B-207ENST00000538243 TMED2Q15363 201 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PIGOQ8TEQ8 1089 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 CHMP6Q96FZ7 201 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 KIF20BQ96Q89 1820 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 MYMKA6NI61 221 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 EIF3BP55884 814 aaKnown RBP17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PSMD2Q13200 908 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PAPD7Q5XG87 772 aaKnown RBP17.75■□□□□ 0.43
KDM2B-207ENST00000538243 SCYL3Q8IZE3 742 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 CYFIP2Q96F07 1278 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-207ENST00000538243 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PLAGL2Q9UPG8 496 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 PVALEFA0A1B0GWK0 134 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 CLGNO14967 610 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 MYBL2P10244 700 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 ATP2A2P16615 1042 aaKnown RBP17.75■□□□□ 0.43
KDM2B-207ENST00000538243 SFR1Q86XK3 245 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 MMGT1Q8N4V1 131 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.433e-6■■□□□ 14
KDM2B-207ENST00000538243 CCNL1Q9UK58 526 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-207ENST00000538243 MINPP1Q9UNW1 487 aa17.75■□□□□ 0.43
KDM2B-207ENST00000538243 POTEFA5A3E0 1075 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SMIM24O75264 130 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 BAG2O95816 211 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 PSMC2P35998 433 aaKnown RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 RASSF2P50749 326 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 POTEGQ6S5H5 508 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 POTEEQ6S8J3 1075 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 PDE2AO00408 941 aaPredicted RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 COPB2P35606 906 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 TRAF1Q13077 416 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SLFN12Q8IYM2 578 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 RAD54LQ92698 747 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 RAB3IPQ96QF0 476 aaPredicted RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 DNAJC7Q99615 494 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 VCXQ9H320 206 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SPATS2LQ9NUQ6 558 aaKnown RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 ECEL1O95672 775 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 CEP63Q96MT8 703 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 GLI1P08151 1106 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 HSPA1LP34931 641 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 STAT3P40763 770 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SLC18A3Q16572 532 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 PTGISQ16647 500 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 TRAPPC3LQ5T215 181 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 SRRM1Q8IYB3 904 aaKnown RBP17.74■□□□□ 0.43
KDM2B-207ENST00000538243 MYCBPAPQ8TBZ2 947 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 CEP95Q96GE4 821 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 YIPF3Q9GZM5 350 aa17.74■□□□□ 0.43
KDM2B-207ENST00000538243 DIP2CQ9Y2E4 1556 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 TNNI1P19237 187 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 SMTNP53814 917 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
KDM2B-207ENST00000538243 CLUL1Q15846 466 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 LIN9Q5TKA1 542 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 SH3GLB2Q9NR46 395 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 ARHGAP20Q9P2F6 1191 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 DNAJC12Q9UKB3 198 aa17.73■□□□□ 0.43
KDM2B-207ENST00000538243 RNF225M0QZC1 329 aaPredicted RBP17.73■□□□□ 0.43
KDM2B-207ENST00000538243 TROVE2P10155 538 aaKnown RBP eCLIP17.73■□□□□ 0.43
KDM2B-207ENST00000538243 AP1ARQ63HQ0 302 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms