RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KCNJ6P48051 423 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 LIG4P49917 911 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 ADALQ6DHV7 355 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 KCNG4Q8TDN1 519 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 SOCS4Q8WXH5 440 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 FAM84AQ96KN4 292 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 PCDHA7Q9UN72 937 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 COL4A1P02462 1669 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 EXOC3O60645 756 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 MCM4P33991 863 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 PRKCEQ02156 737 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 EFCAB12Q6NXP0 572 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 GMCL1P1Q8NEA9 526 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 GTPBP4Q9BZE4 634 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.03□□□□□ -1.124e-8■■□□□ 12.3
MSH6-209ENST00000538136 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 RIC8AQ9NPQ8 531 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 NR2E3Q9Y5X4 410 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 MSH4O15457 936 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 UBA1P22314 1058 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 TFAMQ00059 246 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 AMPD3Q01432 767 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 BRAPQ7Z569 592 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 NECAB2Q7Z6G3 386 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 CNTRLQ7Z7A1 2325 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 POMGNT1Q8WZA1 660 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 FNBP1Q96RU3 617 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 RPS6KC1Q96S38 1066 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 LLPHQ9BRT6 129 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 HDAC6Q9UBN7 1215 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 CIZ1Q9ULV3 898 aaPredicted RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 PFASO15067 1338 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 K7ERI5 159 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 ITGB5P18084 799 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 RFX1P22670 979 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 NBPF20Q3BBV1 942 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 GPAT2Q6NUI2 795 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 EIF2AK1Q9BQI3 630 aaKnown RBP8.03□□□□□ -1.12
MSH6-209ENST00000538136 MXRA8Q9BRK3 442 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 TUBE1Q9UJT0 475 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 HES2Q9Y543 173 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 DNAH12Q6ZR08 3092 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 NT5C1B-RDH14C9J2C7 533 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 WNT7AO00755 349 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 NDUFA8P51970 172 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 PKN1Q16512 942 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 KMT5AQ9NQR1 393 aa8.03□□□□□ -1.12
MSH6-209ENST00000538136 COL4A5P29400 1685 aa8.02□□□□□ -1.12
MSH6-209ENST00000538136 QARSP47897 775 aaKnown RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 TSR1Q2NL82 804 aaKnown RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 ZNF394Q53GI3 561 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 PADI6Q6TGC4 694 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 NXF1Q9UBU9 619 aaKnown RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 RASSF10A6NK89 507 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 NR1I2O75469 434 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 ZNF202O95125 648 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 ARIH2O95376 493 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 PBX3P40426 434 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 PTGISQ16647 500 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 RBM23Q86U06 439 aaKnown RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 ZBTB8OSQ8IWT0 167 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 RGS22Q8NE09 1264 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 RNPEPQ9H4A4 650 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 ZSWIM4Q9H7M6 989 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 RPS6KA5O75582 802 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 PFKFB1P16118 471 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 SMPD1P17405 629 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 SAAL1Q96ER3 474 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 ADPGKQ9BRR6 497 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 TMX1Q9H3N1 280 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 RIOX1Q9H6W3 641 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 FLRT1Q9NZU1 646 aa8.02□□□□□ -1.13
MSH6-209ENST00000538136 SUCLA2Q9P2R7 463 aaPredicted RBP8.02□□□□□ -1.13
MSH6-209ENST00000538136 MYADML2A6NDP7 307 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 SLC15A5A6NIM6 579 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 MEIS2O14770 477 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 DMP1Q13316 513 aaPredicted RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 SLC35G1Q2M3R5 365 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 SCARA5Q6ZMJ2 495 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 SLFN12Q8IYM2 578 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 IFIH1Q9BYX4 1025 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 UNC45AQ9H3U1 944 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 LARSQ9P2J5 1176 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 TNRC6CQ9HCJ0 1690 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 IRS2Q9Y4H2 1338 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 PLA2G4BP0C869 781 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 NMT1P30419 496 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 YWHABP31946 246 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 CPT1AP50416 773 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms