RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SALL4Q9UJQ4 1053 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 SIK3Q9Y2K2 1263 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 FAN1Q9Y2M0 1017 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 NAV1Q8NEY1 1877 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ZBTB7AO95365 584 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ARP10275 920 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 XRCC5P13010 732 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ABCB4P21439 1286 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 POLD1P28340 1107 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 PPP1R2P41236 205 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 PAFAH1B1P43034 410 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 PRPF4BQ13523 1007 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 KLHL7Q8IXQ5 586 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 EHBP1Q8NDI1 1231 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF577Q9BSK1 485 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF70Q9UC06 446 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 CCPG1Q9ULG6 757 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 CCDC151A5D8V7 595 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 EIF2AK2P19525 551 aaKnown RBP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 USP11P51784 963 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 GABPB1Q06547 395 aaPredicted RBP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 GIT2Q14161 759 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 CASP8Q14790 479 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PDXDC1Q6P996 788 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 TTYH3Q9C0H2 523 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PLAGL2Q9UPG8 496 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 DDX60LQ5H9U9 1706 aaKnown RBP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 LRRN2O75325 713 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 BRD3Q15059 726 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 ODR4Q5SWX8 454 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 CCDC170Q8IYT3 715 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 TTLL6Q8N841 843 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 MTMR8Q96EF0 704 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 RAVER2Q9HCJ3 691 aaKnown RBP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 SERPINA10Q9UK55 444 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PRDM4Q9UKN5 801 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PCNTO95613 3336 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 A0A087X0T9 212 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PALMO75781 387 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 GFPT2O94808 682 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 KIF20AO95235 890 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 FAM228BP0C875 321 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 PSMD2Q13200 908 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 EXOC3L4Q17RC7 722 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 FLAD1Q8NFF5 587 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 GOPCQ9HD26 462 aa9.57□□□□□ -0.88
UBE3B-208ENST00000538070 CHORDC1Q9UHD1 332 aaPredicted RBP9.57□□□□□ -0.88
UBE3B-208ENST00000538070 TISP43B9A030 160 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 DPEP1P16444 411 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 NT5C2P49902 561 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 TTC19Q6DKK2 380 aaPredicted RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 TRAPPC11Q7Z392 1133 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 FAM178BQ8IXR5 827 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 NOX5Q96PH1 765 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 LRRC1Q9BTT6 524 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 WDR18Q9BV38 432 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 SMCHD1A6NHR9 2005 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 RREB1Q92766 1687 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 MYH10P35580 1976 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 ARHGEF35A5YM69 484 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 TMEM110-MUSTN1A8MSY1 372 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 AKAP3O75969 853 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 NR3C1P04150 777 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 CKAP4Q07065 602 aaKnown RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
UBE3B-208ENST00000538070 NAA35Q5VZE5 725 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 LDHDQ86WU2 507 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 TRIM58Q8NG06 486 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 IDI2Q9BXS1 227 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 EHD4Q9H223 541 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 KCNMB3Q9NPA1 279 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 GCNT4Q9P109 453 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 MYO1AQ9UBC5 1043 aa9.56□□□□□ -0.88
UBE3B-208ENST00000538070 TESPA1A2RU30 521 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 EXOC3O60645 756 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 FLOT1O75955 427 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 MYBL2P10244 700 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 KLRC1P26715 233 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 GUCY2FP51841 1108 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 SLC12A3P55017 1021 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 SLC15A2Q16348 729 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 MEA1Q16626 185 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 NIM1KQ8IY84 436 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 SPDYE2BA6NHP3 402 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms