RNA–Protein interactions for RNA: ENST00000538065.5

ATXN7-213, Transcript of ataxin 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN7, Length 6,842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN7-213ENST00000538065 TUBB4AP04350 444 aa17.42■□□□□ 0.38
ATXN7-213ENST00000538065 SAT1P21673 171 aa17.42■□□□□ 0.38
ATXN7-213ENST00000538065 COPB1P53618 953 aaKnown RBP17.42■□□□□ 0.38
ATXN7-213ENST00000538065 MESDQ14696 234 aa17.42■□□□□ 0.38
ATXN7-213ENST00000538065 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
ATXN7-213ENST00000538065 POLR3EQ9NVU0 708 aa17.42■□□□□ 0.38
ATXN7-213ENST00000538065 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 IMPACTQ9P2X3 320 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 ZNF658Q5TYW1 1059 aaPredicted RBP17.41■□□□□ 0.38
ATXN7-213ENST00000538065 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.41■□□□□ 0.38
ATXN7-213ENST00000538065 PARD3BQ8TEW8 1205 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 IQCDQ96DY2 449 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 CTAGE3PQ8IX95 158 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 BBS5Q8N3I7 341 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 LMCD1Q9NZU5 365 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 VEGFAP15692 232 aaPredicted RBP17.41■□□□□ 0.38
ATXN7-213ENST00000538065 KCNA4P22459 653 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
ATXN7-213ENST00000538065 TMEM62Q0P6H9 643 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
ATXN7-213ENST00000538065 MCPH1Q8NEM0 835 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 CUL4BQ13620 913 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 CAPN12Q6ZSI9 719 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 CCNYQ8ND76 341 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 LPAR1Q92633 364 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 NDUFB10O96000 172 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 MXI1P50539 228 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 PRPSAP1Q14558 356 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 PTPN21Q16825 1174 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 OXER1Q8TDS5 423 aa17.41■□□□□ 0.38
ATXN7-213ENST00000538065 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 GBA2Q9HCG7 927 aaPredicted RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 DHTKD1Q96HY7 919 aaPredicted RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 E9PMD0 336 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 GFPT2O94808 682 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 SFNP31947 248 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 QARSP47897 775 aaKnown RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 SMC6Q96SB8 1091 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 DESI2Q9BSY9 194 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 TSPY1Q01534 308 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 MTIF3Q9H2K0 278 aaKnown RBP17.4■□□□□ 0.38
ATXN7-213ENST00000538065 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 POTECB2RU33 542 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 CSF1RP07333 972 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 ZNF18P17022 549 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 FAM213AQ9BRX8 229 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 TMEM63CQ9P1W3 806 aa17.4■□□□□ 0.38
ATXN7-213ENST00000538065 CFAP221Q4G0U5 840 aa17.39■□□□□ 0.38
ATXN7-213ENST00000538065 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.38
ATXN7-213ENST00000538065 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.38
ATXN7-213ENST00000538065 NT5C2P49902 561 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 LXNQ9BS40 222 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 JPH1Q9HDC5 661 aaPredicted RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 MAN1B1Q9UKM7 699 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 GPC3P51654 580 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 NOC2LQ9Y3T9 749 aaKnown RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 GGPS1O95749 300 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 HPDP32754 393 aaPredicted RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 DCCP43146 1447 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 POTEFA5A3E0 1075 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 HUS1O60921 280 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 TAOK1Q7L7X3 1001 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 KRT12Q99456 494 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 PIN4Q9Y237 131 aaKnown RBP17.39■□□□□ 0.37
ATXN7-213ENST00000538065 MEGF6O75095 1541 aa17.39■□□□□ 0.37
ATXN7-213ENST00000538065 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
ATXN7-213ENST00000538065 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
ATXN7-213ENST00000538065 CDC27P30260 824 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 CDO1Q16878 200 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 ADCY8P40145 1251 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 EVCP57679 992 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 MAP7D3Q8IWC1 876 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 PRMT6Q96LA8 375 aaPredicted RBP17.38■□□□□ 0.37
ATXN7-213ENST00000538065 ARHGAP6O43182 974 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 ATP5DP30049 168 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 FKBP3Q00688 224 aaKnown RBP17.38■□□□□ 0.37
ATXN7-213ENST00000538065 PPFIA1Q13136 1202 aa17.38■□□□□ 0.37
ATXN7-213ENST00000538065 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms