RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 C6orf50Q9HD87 102 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 AMHP03971 560 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 CYP3A4P08684 503 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 IFNAR1P17181 557 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 POU3F3P20264 500 aaPredicted RBP16.99■□□□□ 0.31
LRRK1-211ENST00000538064 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
LRRK1-211ENST00000538064 ZNF76P36508 570 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
LRRK1-211ENST00000538064 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
LRRK1-211ENST00000538064 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
LRRK1-211ENST00000538064 CCDC148Q8NFR7 591 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 ARNTL2Q8WYA1 636 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 APBB2Q92870 758 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 RAD9AQ99638 391 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 CERS4Q9HA82 394 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 PRDM6Q9NQX0 595 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 THEGQ9P2T0 379 aa16.99■□□□□ 0.31
LRRK1-211ENST00000538064 IGLV3-22A0A075B6J6 115 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 FAM86B1E9PN63 330 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 RBAK-RBAKDNI3L0D1 243 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 FAM86B2P0C5J1 330 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 GNA11P29992 359 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 SETQ01105 290 aaPredicted RBP16.98■□□□□ 0.31
LRRK1-211ENST00000538064 MGAT3Q09327 533 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 MARCH8Q5T0T0 291 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 PLPPR4Q7Z2D5 763 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 RSPH3Q86UC2 560 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 OSBPL7Q9BZF2 842 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 TM6SF1Q9BZW5 370 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 CYP46A1Q9Y6A2 500 aa16.98■□□□□ 0.31
LRRK1-211ENST00000538064 TTC28Q96AY4 2481 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 LINC01553A4QN01 128 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 RFXAPO00287 272 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 ADAMTS3O15072 1205 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 ATG7O95352 703 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 RPLP2P05387 115 aaKnown RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 PLCB4Q15147 1175 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 SPRED2Q7Z698 418 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 MYOCDQ8IZQ8 938 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 BICD2Q8TD16 824 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
LRRK1-211ENST00000538064 TRPC6Q9Y210 931 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 MTCH2Q9Y6C9 303 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 REV3LO60673 3130 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 EVPLQ92817 2033 aa16.97■□□□□ 0.31
LRRK1-211ENST00000538064 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 CCNE2O96020 404 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 CHRNA1P02708 482 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 INSRRP14616 1297 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 SLC26A2P50443 739 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 STAT5BP51692 787 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 IGBP1P78318 339 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 HTRA4P83105 476 aaPredicted RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 FAM117BQ6P1L5 589 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 SYMPKQ92797 1274 aaKnown RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 TGS1Q96RS0 853 aaKnown RBP16.96■□□□□ 0.31
LRRK1-211ENST00000538064 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
LRRK1-211ENST00000538064 TTC3P53804 2025 aa16.96■□□□□ 0.3
LRRK1-211ENST00000538064 DDX39AO00148 427 aaKnown RBP16.95■□□□□ 0.3
LRRK1-211ENST00000538064 IPO5O00410 1097 aaKnown RBP16.95■□□□□ 0.3
LRRK1-211ENST00000538064 DHX15O43143 795 aaKnown RBP16.95■□□□□ 0.3
LRRK1-211ENST00000538064 LPXNO60711 386 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 GHRP10912 638 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 ERVK-21P61565 698 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 MRPS6P82932 125 aaKnown RBP16.95■□□□□ 0.3
LRRK1-211ENST00000538064 GRB10Q13322 594 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 DNAJB3Q8WWF6 145 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
LRRK1-211ENST00000538064 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 ATG2AQ2TAZ0 1938 aa16.95■□□□□ 0.3
LRRK1-211ENST00000538064 KIAA1671Q9BY89 1806 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.94■□□□□ 0.3
LRRK1-211ENST00000538064 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 CIITAP33076 1130 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 LPIN1Q14693 890 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 FBXO47Q5MNV8 452 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 FAM160B1Q5W0V3 765 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
LRRK1-211ENST00000538064 TSHZ1Q6ZSZ6 1077 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms