RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 MEI1Q5TIA1 1274 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
CHFR-213ENST00000536843 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
CHFR-213ENST00000536843 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 TBC1D1Q86TI0 1168 aaPredicted RBP17.06■□□□□ 0.32
CHFR-213ENST00000536843 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 EPHB6O15197 1021 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 SLC1A4P43007 532 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 CCNG1P51959 295 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 CACNA2D4Q7Z3S7 1137 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
CHFR-213ENST00000536843 PALMO75781 387 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 NQO1P15559 274 aaKnown RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 PPARDQ03181 441 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 SLC5A9Q2M3M2 681 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 SBK1Q52WX2 424 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 PCDHGC5Q9Y5F6 944 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 CNTNAP5Q8WYK1 1306 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 LRRC53A6NM62 1247 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 IFI16Q16666 785 aaKnown RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 FAM210AQ96ND0 272 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 ANKRD27Q96NW4 1050 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 YIPF3Q9GZM5 350 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
CHFR-213ENST00000536843 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
CHFR-213ENST00000536843 GFPT1Q06210 699 aaPredicted RBP17.04■□□□□ 0.32
CHFR-213ENST00000536843 THEMIS2Q5TEJ8 643 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 TRPM8Q7Z2W7 1104 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 KLHL7Q8IXQ5 586 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
CHFR-213ENST00000536843 BAP1Q92560 729 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 FTCDO95954 541 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 NEFHP12036 1026 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
CHFR-213ENST00000536843 PPP1R2P41236 205 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 NAB2Q15742 525 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 KRT71Q3SY84 523 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
CHFR-213ENST00000536843 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 SEPT2Q15019 361 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
CHFR-213ENST00000536843 SLC30A9Q6PML9 568 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 RRAGAQ7L523 313 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 TMC3Q7Z5M5 1100 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
CHFR-213ENST00000536843 MFN1Q8IWA4 741 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
CHFR-213ENST00000536843 ZFATQ9P243 1243 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHFR-213ENST00000536843 AGAP1Q9UPQ3 857 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 COL24A1Q17RW2 1714 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
CHFR-213ENST00000536843 ADAMTS3O15072 1205 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 SART1O43290 800 aaKnown RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 CDC25CP30307 473 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 MCM7P33993 719 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 RFC4P35249 363 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 F8VZ95 297 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 FERP16591 822 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 ABL2P42684 1182 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 ALDH5A1P51649 535 aaPredicted RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 EIF3BP55884 814 aaKnown RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 GRIK5Q16478 980 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 HGSNATQ68CP4 663 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 CWF19L1Q69YN2 538 aaKnown RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 PDXDC1Q6P996 788 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 TEX9Q8N6V9 391 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 MDM1Q8TC05 714 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 EDEM3Q9BZQ6 932 aa17.02■□□□□ 0.32
CHFR-213ENST00000536843 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.32
CHFR-213ENST00000536843 LY75O60449 1722 aa17.02■□□□□ 0.31
CHFR-213ENST00000536843 GOLGA6L10A0A0M3HER8 536 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 NKRFO15226 690 aaKnown RBP eCLIP17.01■□□□□ 0.31
CHFR-213ENST00000536843 SCG2P13521 617 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 NCALDP61601 193 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 TFAP4Q01664 338 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 ANKRD20A2Q5SQ80 823 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 ANKRD20A1Q5TYW2 823 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms