RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 MISP3Q96FF7 219 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
CCDC60-203ENST00000536742 PAWRQ96IZ0 340 aaKnown RBP8.61□□□□□ -1.03
CCDC60-203ENST00000536742 KCNH6Q9H252 994 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 TNKS2Q9H2K2 1166 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 EPHX3Q9H6B9 360 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 CAPN6Q9Y6Q1 641 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 RIC1Q4ADV7 1423 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 BAHCC1Q9P281 2608 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 TAF1P21675 1872 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 FYB1O15117 783 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 NAT2P11245 290 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 LACTBP83111 547 aaPredicted RBP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 SLC7A5Q01650 507 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 RAB33AQ14088 237 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 ZYXQ15942 572 aaKnown RBP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 ABI1Q8IZP0 508 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 USP38Q8NB14 1042 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 RAET1EQ8TD07 263 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 WNK4Q96J92 1243 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 ZC3H7BQ9UGR2 993 aaKnown RBP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC60-203ENST00000536742 RIPOR2Q9Y4F9 1068 aa8.6□□□□□ -1.03
CCDC60-203ENST00000536742 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 PPM1GO15355 546 aaPredicted RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 ZNF143P52747 638 aaPredicted RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 THAP5Q7Z6K1 395 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 FLCNQ8NFG4 579 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 DHX38Q92620 1227 aaKnown RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 NYXQ9GZU5 481 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
CCDC60-203ENST00000536742 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 ADGRE2Q9UHX3 823 aa8.59□□□□□ -1.03
CCDC60-203ENST00000536742 KRTAP9-6A0A140TA67 174 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 ZNF280AP59817 542 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-203ENST00000536742 PRAMEF18Q5VWM3 479 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 DTWD2Q8NBA8 298 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 PTPN18Q99952 460 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 MKRN2Q9H000 416 aaKnown RBP8.58□□□□□ -1.04
CCDC60-203ENST00000536742 ASCC2Q9H1I8 757 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-203ENST00000536742 SRRDQ9UH36 339 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
CCDC60-203ENST00000536742 CBX7O95931 251 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
CCDC60-203ENST00000536742 NBPF9Q3BBW0 867 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 GNPTABQ3T906 1256 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 VHLLQ6RSH7 139 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 LRP10Q7Z4F1 713 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 SP8Q8IXZ3 490 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 CCDC144CPQ8IYA2 1237 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 AGBL5Q8NDL9 886 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
CCDC60-203ENST00000536742 Q96M66 194 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 CACNA1BQ00975 2339 aa8.57□□□□□ -1.04
CCDC60-203ENST00000536742 AUHQ13825 339 aaKnown RBP8.56□□□□□ -1.04
CCDC60-203ENST00000536742 PRKG1Q13976 671 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 TCEAL1Q15170 157 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 DDR2Q16832 855 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 NKPD1Q17RQ9 610 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 LARP1BQ659C4 914 aaKnown RBP8.56□□□□□ -1.04
CCDC60-203ENST00000536742 SPACA3Q8IXA5 215 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 TTC5Q8N0Z6 440 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 MKL1Q969V6 931 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 ARHGAP39Q9C0H5 1083 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 EPN3Q9H201 632 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 GPATCH2Q9NW75 528 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 VAV3Q9UKW4 847 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 SLC5A6Q9Y289 635 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 PCDHB12Q9Y5F1 795 aa8.56□□□□□ -1.04
CCDC60-203ENST00000536742 PRR33A8MZF0 331 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 TLR2O60603 784 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 BBOX1O75936 387 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 KRT37O76014 449 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 VIL1P09327 827 aaKnown RBP8.55□□□□□ -1.04
CCDC60-203ENST00000536742 ITGB8P26012 769 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 PRKCQQ04759 706 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 TNK2Q07912 1038 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 FAM181AQ8N9Y4 354 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 HRASLS5Q96KN8 279 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 DEFB118Q96PH6 123 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
CCDC60-203ENST00000536742 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
CCDC60-203ENST00000536742 SRFP11831 508 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 ITIH2P19823 946 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-203ENST00000536742 AAK1Q2M2I8 961 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms